Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
OPHN1O60890 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
OPHN1O60890 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
OPHN1O60890 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
OPHN1O60890 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
OPHN1O60890 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
OPHN1O60890 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
OPHN1O60890 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
OPHN1O60890 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.1■□□□□ 0.17
OPHN1O60890 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
OPHN1O60890 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.1■□□□□ 0.17
OPHN1O60890 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
OPHN1O60890 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
OPHN1O60890 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
OPHN1O60890 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
OPHN1O60890 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.1■□□□□ 0.17
OPHN1O60890 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.1■□□□□ 0.17
OPHN1O60890 SERBP1P3-201ENST00000459980 809 ntBASIC16.1■□□□□ 0.17
OPHN1O60890 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.1■□□□□ 0.17
OPHN1O60890 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
OPHN1O60890 AC055876.2-201ENST00000531834 546 ntBASIC16.1■□□□□ 0.17
OPHN1O60890 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
OPHN1O60890 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.1■□□□□ 0.17
OPHN1O60890 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
OPHN1O60890 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
OPHN1O60890 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
OPHN1O60890 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
OPHN1O60890 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
OPHN1O60890 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.1■□□□□ 0.17
OPHN1O60890 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
OPHN1O60890 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.1■□□□□ 0.17
OPHN1O60890 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
OPHN1O60890 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
OPHN1O60890 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.1■□□□□ 0.17
OPHN1O60890 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
OPHN1O60890 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
OPHN1O60890 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
OPHN1O60890 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
OPHN1O60890 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
OPHN1O60890 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
OPHN1O60890 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
OPHN1O60890 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
OPHN1O60890 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
OPHN1O60890 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
OPHN1O60890 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
OPHN1O60890 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
OPHN1O60890 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
OPHN1O60890 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
OPHN1O60890 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
OPHN1O60890 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
OPHN1O60890 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
OPHN1O60890 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
OPHN1O60890 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.09■□□□□ 0.17
OPHN1O60890 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
OPHN1O60890 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
OPHN1O60890 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
OPHN1O60890 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.09■□□□□ 0.17
OPHN1O60890 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
OPHN1O60890 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
OPHN1O60890 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.09■□□□□ 0.17
OPHN1O60890 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.09■□□□□ 0.17
OPHN1O60890 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
OPHN1O60890 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
OPHN1O60890 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.09■□□□□ 0.17
OPHN1O60890 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
OPHN1O60890 TTTY23B-201ENST00000442790 549 ntBASIC16.09■□□□□ 0.17
OPHN1O60890 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
OPHN1O60890 AC022210.1-201ENST00000449856 793 ntBASIC16.09■□□□□ 0.17
OPHN1O60890 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
OPHN1O60890 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.09■□□□□ 0.17
OPHN1O60890 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.09■□□□□ 0.17
OPHN1O60890 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.09■□□□□ 0.17
OPHN1O60890 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.09■□□□□ 0.17
OPHN1O60890 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.09■□□□□ 0.17
OPHN1O60890 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.09■□□□□ 0.17
OPHN1O60890 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.09■□□□□ 0.17
OPHN1O60890 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.09■□□□□ 0.17
OPHN1O60890 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.09■□□□□ 0.17
OPHN1O60890 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
OPHN1O60890 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.09■□□□□ 0.17
OPHN1O60890 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
OPHN1O60890 SLC7A15P-201ENST00000424028 1363 ntBASIC16.09■□□□□ 0.17
OPHN1O60890 KRT8P44-201ENST00000441609 1350 ntBASIC16.09■□□□□ 0.17
OPHN1O60890 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.09■□□□□ 0.17
OPHN1O60890 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
OPHN1O60890 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
OPHN1O60890 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.09■□□□□ 0.17
OPHN1O60890 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
OPHN1O60890 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.09■□□□□ 0.17
OPHN1O60890 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
OPHN1O60890 AC126365.1-201ENST00000578585 1514 ntBASIC16.09■□□□□ 0.17
OPHN1O60890 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
OPHN1O60890 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
OPHN1O60890 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
OPHN1O60890 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
OPHN1O60890 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
OPHN1O60890 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
OPHN1O60890 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
OPHN1O60890 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
OPHN1O60890 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms