Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF13O43567 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.04□□□□□ -0.16
RNF13O43567 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF13O43567 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF13O43567 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.04□□□□□ -0.16
RNF13O43567 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF13O43567 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF13O43567 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF13O43567 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF13O43567 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RNF13O43567 ZBED1P1-201ENST00000502364 1930 ntBASIC14.03□□□□□ -0.16
RNF13O43567 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RNF13O43567 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF13O43567 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RNF13O43567 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF13O43567 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.03□□□□□ -0.16
RNF13O43567 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF13O43567 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.03□□□□□ -0.16
RNF13O43567 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RNF13O43567 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.03□□□□□ -0.16
RNF13O43567 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF13O43567 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RNF13O43567 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF13O43567 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF13O43567 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF13O43567 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF13O43567 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RNF13O43567 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RNF13O43567 AC074338.1-201ENST00000416825 156 ntBASIC14.03□□□□□ -0.16
RNF13O43567 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RNF13O43567 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.03□□□□□ -0.16
RNF13O43567 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.03□□□□□ -0.16
RNF13O43567 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.03□□□□□ -0.16
RNF13O43567 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.03□□□□□ -0.16
RNF13O43567 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF13O43567 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF13O43567 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.03□□□□□ -0.16
RNF13O43567 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RNF13O43567 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.03□□□□□ -0.16
RNF13O43567 AL512361.1-201ENST00000554200 418 ntBASIC14.03□□□□□ -0.16
RNF13O43567 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF13O43567 AC051619.7-201ENST00000568314 623 ntBASIC14.03□□□□□ -0.16
RNF13O43567 AC015911.4-201ENST00000588022 1070 ntBASIC14.03□□□□□ -0.16
RNF13O43567 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.03□□□□□ -0.16
RNF13O43567 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.03□□□□□ -0.16
RNF13O43567 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RNF13O43567 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.03□□□□□ -0.16
RNF13O43567 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF13O43567 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF13O43567 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.03□□□□□ -0.16
RNF13O43567 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.03□□□□□ -0.16
RNF13O43567 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.03□□□□□ -0.16
RNF13O43567 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF13O43567 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RNF13O43567 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.03□□□□□ -0.16
RNF13O43567 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RNF13O43567 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RNF13O43567 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF13O43567 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF13O43567 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
RNF13O43567 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF13O43567 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF13O43567 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.03□□□□□ -0.16
RNF13O43567 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.03□□□□□ -0.16
RNF13O43567 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF13O43567 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.03□□□□□ -0.16
RNF13O43567 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF13O43567 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF13O43567 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RNF13O43567 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF13O43567 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RNF13O43567 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
RNF13O43567 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RNF13O43567 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RNF13O43567 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RNF13O43567 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.02□□□□□ -0.16
RNF13O43567 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RNF13O43567 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RNF13O43567 AC067750.1-201ENST00000608826 6545 ntBASIC14.02□□□□□ -0.16
RNF13O43567 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RNF13O43567 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RNF13O43567 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
RNF13O43567 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.02□□□□□ -0.16
RNF13O43567 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
RNF13O43567 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.02□□□□□ -0.16
RNF13O43567 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RNF13O43567 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
RNF13O43567 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RNF13O43567 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
RNF13O43567 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RNF13O43567 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RNF13O43567 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.02□□□□□ -0.16
RNF13O43567 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RNF13O43567 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
RNF13O43567 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RNF13O43567 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RNF13O43567 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RNF13O43567 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.02□□□□□ -0.17
RNF13O43567 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.02□□□□□ -0.17
RNF13O43567 METTL21AP1-201ENST00000438852 635 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms