Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRTM2O43300 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRTM2O43300 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LRRTM2O43300 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
LRRTM2O43300 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRTM2O43300 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRTM2O43300 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LRRTM2O43300 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRRTM2O43300 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRTM2O43300 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.44□□□□□ -0.1
LRRTM2O43300 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LRRTM2O43300 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRRTM2O43300 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.44□□□□□ -0.1
LRRTM2O43300 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRRTM2O43300 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.44□□□□□ -0.1
LRRTM2O43300 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.43□□□□□ -0.1
LRRTM2O43300 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM2O43300 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.43□□□□□ -0.1
LRRTM2O43300 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.43□□□□□ -0.1
LRRTM2O43300 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.43□□□□□ -0.1
LRRTM2O43300 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.43□□□□□ -0.1
LRRTM2O43300 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LRRTM2O43300 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM2O43300 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM2O43300 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LRRTM2O43300 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM2O43300 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM2O43300 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM2O43300 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.43□□□□□ -0.1
LRRTM2O43300 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.43□□□□□ -0.1
LRRTM2O43300 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM2O43300 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
LRRTM2O43300 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.43□□□□□ -0.1
LRRTM2O43300 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM2O43300 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.43□□□□□ -0.1
LRRTM2O43300 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM2O43300 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM2O43300 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM2O43300 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
LRRTM2O43300 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LRRTM2O43300 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM2O43300 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM2O43300 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.43□□□□□ -0.1
LRRTM2O43300 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.43□□□□□ -0.1
LRRTM2O43300 AC104596.2-201ENST00000512793 793 ntBASIC14.43□□□□□ -0.1
LRRTM2O43300 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM2O43300 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.43□□□□□ -0.1
LRRTM2O43300 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.43□□□□□ -0.1
LRRTM2O43300 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.43□□□□□ -0.1
LRRTM2O43300 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.43□□□□□ -0.1
LRRTM2O43300 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.43□□□□□ -0.1
LRRTM2O43300 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.43□□□□□ -0.1
LRRTM2O43300 MIR8072-201ENST00000614241 80 ntBASIC14.43□□□□□ -0.1
LRRTM2O43300 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
LRRTM2O43300 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM2O43300 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM2O43300 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LRRTM2O43300 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM2O43300 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM2O43300 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LRRTM2O43300 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.43□□□□□ -0.1
LRRTM2O43300 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM2O43300 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM2O43300 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM2O43300 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
LRRTM2O43300 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM2O43300 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM2O43300 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.43□□□□□ -0.1
LRRTM2O43300 CLK3P2-201ENST00000427566 1453 ntBASIC14.43□□□□□ -0.1
LRRTM2O43300 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM2O43300 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
LRRTM2O43300 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.42□□□□□ -0.1
LRRTM2O43300 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM2O43300 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM2O43300 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM2O43300 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.42□□□□□ -0.1
LRRTM2O43300 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM2O43300 AL359258.3-201ENST00000622910 2331 ntBASIC14.42□□□□□ -0.1
LRRTM2O43300 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LRRTM2O43300 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM2O43300 AL589702.1-201ENST00000641229 1509 ntBASIC14.42□□□□□ -0.1
LRRTM2O43300 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LRRTM2O43300 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.42□□□□□ -0.1
LRRTM2O43300 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
LRRTM2O43300 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM2O43300 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LRRTM2O43300 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM2O43300 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM2O43300 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
LRRTM2O43300 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM2O43300 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM2O43300 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.42□□□□□ -0.1
LRRTM2O43300 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
LRRTM2O43300 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM2O43300 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.42□□□□□ -0.1
LRRTM2O43300 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
LRRTM2O43300 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.42□□□□□ -0.1
LRRTM2O43300 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LRRTM2O43300 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM2O43300 RRP7BP-205ENST00000566851 833 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms