Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLOCKO15516 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CLOCKO15516 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CLOCKO15516 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.68□□□□□ -0.06
CLOCKO15516 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLOCKO15516 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.68□□□□□ -0.06
CLOCKO15516 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLOCKO15516 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
CLOCKO15516 CICP20-201ENST00000443330 2801 ntBASIC14.68□□□□□ -0.06
CLOCKO15516 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
CLOCKO15516 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.68□□□□□ -0.06
CLOCKO15516 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.67□□□□□ -0.06
CLOCKO15516 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLOCKO15516 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLOCKO15516 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLOCKO15516 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLOCKO15516 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.67□□□□□ -0.06
CLOCKO15516 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLOCKO15516 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLOCKO15516 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.67□□□□□ -0.06
CLOCKO15516 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLOCKO15516 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLOCKO15516 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
CLOCKO15516 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLOCKO15516 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CLOCKO15516 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLOCKO15516 AC002056.1-201ENST00000395613 760 ntBASIC14.67□□□□□ -0.06
CLOCKO15516 AC004987.2-201ENST00000395959 1148 ntBASIC14.67□□□□□ -0.06
CLOCKO15516 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLOCKO15516 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.67□□□□□ -0.06
CLOCKO15516 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.67□□□□□ -0.06
CLOCKO15516 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.67□□□□□ -0.06
CLOCKO15516 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLOCKO15516 AP000344.2-201ENST00000512987 629 ntBASIC14.67□□□□□ -0.06
CLOCKO15516 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.67□□□□□ -0.06
CLOCKO15516 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.67□□□□□ -0.06
CLOCKO15516 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.67□□□□□ -0.06
CLOCKO15516 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.67□□□□□ -0.06
CLOCKO15516 AC004835.2-201ENST00000603762 682 ntBASIC14.67□□□□□ -0.06
CLOCKO15516 AC106028.4-201ENST00000614509 607 ntBASIC14.67□□□□□ -0.06
CLOCKO15516 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.67□□□□□ -0.06
CLOCKO15516 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.67□□□□□ -0.06
CLOCKO15516 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.67□□□□□ -0.06
CLOCKO15516 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.67□□□□□ -0.06
CLOCKO15516 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CLOCKO15516 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLOCKO15516 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLOCKO15516 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.67□□□□□ -0.06
CLOCKO15516 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLOCKO15516 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLOCKO15516 AL928921.2-201ENST00000641325 2442 ntBASIC14.67□□□□□ -0.06
CLOCKO15516 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.67□□□□□ -0.06
CLOCKO15516 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.67□□□□□ -0.06
CLOCKO15516 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLOCKO15516 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLOCKO15516 ACE3P-201ENST00000423435 1973 ntBASIC14.67□□□□□ -0.06
CLOCKO15516 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.67□□□□□ -0.06
CLOCKO15516 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.67□□□□□ -0.06
CLOCKO15516 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLOCKO15516 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLOCKO15516 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLOCKO15516 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLOCKO15516 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLOCKO15516 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLOCKO15516 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLOCKO15516 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.66□□□□□ -0.06
CLOCKO15516 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLOCKO15516 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.66□□□□□ -0.06
CLOCKO15516 HSPA7-201ENST00000445535 1927 ntBASIC14.66□□□□□ -0.06
CLOCKO15516 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLOCKO15516 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLOCKO15516 AC107918.4-201ENST00000641966 3141 ntBASIC14.66□□□□□ -0.06
CLOCKO15516 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CLOCKO15516 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.66□□□□□ -0.06
CLOCKO15516 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLOCKO15516 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLOCKO15516 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.66□□□□□ -0.06
CLOCKO15516 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.66□□□□□ -0.06
CLOCKO15516 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLOCKO15516 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CLOCKO15516 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLOCKO15516 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.66□□□□□ -0.06
CLOCKO15516 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLOCKO15516 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLOCKO15516 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLOCKO15516 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLOCKO15516 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLOCKO15516 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.66□□□□□ -0.06
CLOCKO15516 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.66□□□□□ -0.06
CLOCKO15516 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLOCKO15516 TIMM8BP1-201ENST00000452384 211 ntBASIC14.66□□□□□ -0.06
CLOCKO15516 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLOCKO15516 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.66□□□□□ -0.06
CLOCKO15516 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLOCKO15516 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.66□□□□□ -0.06
CLOCKO15516 AL450472.2-201ENST00000603663 1156 ntBASIC14.66□□□□□ -0.06
CLOCKO15516 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.66□□□□□ -0.06
CLOCKO15516 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLOCKO15516 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLOCKO15516 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms