Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXN1O15353 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXN1O15353 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
FOXN1O15353 AZGP1P1-201ENST00000411909 902 ntBASIC18.26■□□□□ 0.51
FOXN1O15353 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
FOXN1O15353 AC019193.1-201ENST00000506678 823 ntBASIC18.26■□□□□ 0.51
FOXN1O15353 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
FOXN1O15353 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXN1O15353 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC18.26■□□□□ 0.51
FOXN1O15353 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXN1O15353 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXN1O15353 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXN1O15353 AC132938.4-201ENST00000623835 848 ntBASIC18.26■□□□□ 0.51
FOXN1O15353 AC127024.7-201ENST00000625101 200 ntBASIC18.26■□□□□ 0.51
FOXN1O15353 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXN1O15353 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXN1O15353 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXN1O15353 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.26■□□□□ 0.51
FOXN1O15353 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.26■□□□□ 0.51
FOXN1O15353 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXN1O15353 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXN1O15353 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
FOXN1O15353 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN1O15353 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN1O15353 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN1O15353 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
FOXN1O15353 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN1O15353 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.25■□□□□ 0.51
FOXN1O15353 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN1O15353 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN1O15353 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN1O15353 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXN1O15353 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN1O15353 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN1O15353 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.25■□□□□ 0.51
FOXN1O15353 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN1O15353 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN1O15353 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
FOXN1O15353 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
FOXN1O15353 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN1O15353 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXN1O15353 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN1O15353 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN1O15353 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN1O15353 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
FOXN1O15353 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN1O15353 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN1O15353 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
FOXN1O15353 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXN1O15353 AL157792.1-201ENST00000488281 530 ntBASIC18.25■□□□□ 0.51
FOXN1O15353 RNA5SP486-201ENST00000515961 83 ntBASIC18.25■□□□□ 0.51
FOXN1O15353 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
FOXN1O15353 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
FOXN1O15353 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXN1O15353 CENPX-208ENST00000584347 799 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXN1O15353 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC18.25■□□□□ 0.51
FOXN1O15353 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
FOXN1O15353 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.25■□□□□ 0.51
FOXN1O15353 GMFG-209ENST00000600322 622 ntTSL 5 BASIC18.25■□□□□ 0.51
FOXN1O15353 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC18.25■□□□□ 0.51
FOXN1O15353 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
FOXN1O15353 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
FOXN1O15353 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN1O15353 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXN1O15353 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN1O15353 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXN1O15353 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN1O15353 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXN1O15353 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN1O15353 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
FOXN1O15353 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
FOXN1O15353 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXN1O15353 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXN1O15353 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXN1O15353 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.24■□□□□ 0.51
FOXN1O15353 AC011270.2-201ENST00000624293 2550 ntBASIC18.24■□□□□ 0.51
FOXN1O15353 AC092850.2-201ENST00000623821 2697 ntBASIC18.24■□□□□ 0.51
FOXN1O15353 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXN1O15353 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.24■□□□□ 0.51
FOXN1O15353 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXN1O15353 AC026316.1-201ENST00000398900 414 ntBASIC18.24■□□□□ 0.51
FOXN1O15353 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC18.24■□□□□ 0.51
FOXN1O15353 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXN1O15353 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
FOXN1O15353 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXN1O15353 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.24■□□□□ 0.51
FOXN1O15353 AC103691.2-201ENST00000618824 433 ntBASIC18.24■□□□□ 0.51
FOXN1O15353 AL805961.1-201ENST00000642026 753 ntBASIC18.24■□□□□ 0.51
FOXN1O15353 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXN1O15353 AC126177.1-201ENST00000547829 2218 ntBASIC18.24■□□□□ 0.51
FOXN1O15353 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXN1O15353 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
FOXN1O15353 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
FOXN1O15353 AL138709.1-201ENST00000614840 1693 ntBASIC18.24■□□□□ 0.51
FOXN1O15353 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
FOXN1O15353 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.24■□□□□ 0.51
FOXN1O15353 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXN1O15353 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXN1O15353 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
FOXN1O15353 AL023775.1-201ENST00000454907 1746 ntBASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms