Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15□□□□□ -0.01
E2F3O00716 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15□□□□□ -0.01
E2F3O00716 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
E2F3O00716 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15□□□□□ -0.01
E2F3O00716 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
E2F3O00716 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15□□□□□ -0.01
E2F3O00716 AC092337.1-201ENST00000568699 1129 ntBASIC15□□□□□ -0.01
E2F3O00716 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15□□□□□ -0.01
E2F3O00716 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15□□□□□ -0.01
E2F3O00716 AC004461.2-201ENST00000629517 803 ntBASIC15□□□□□ -0.01
E2F3O00716 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
E2F3O00716 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15□□□□□ -0.01
E2F3O00716 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15□□□□□ -0.01
E2F3O00716 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
E2F3O00716 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
E2F3O00716 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
E2F3O00716 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
E2F3O00716 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15□□□□□ -0.01
E2F3O00716 SLC9A7P1-202ENST00000556476 2239 ntBASIC15□□□□□ -0.01
E2F3O00716 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
E2F3O00716 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
E2F3O00716 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15□□□□□ -0.01
E2F3O00716 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
E2F3O00716 AC063926.3-201ENST00000624734 5658 ntBASIC14.99□□□□□ -0.01
E2F3O00716 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
E2F3O00716 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
E2F3O00716 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
E2F3O00716 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.99□□□□□ -0.01
E2F3O00716 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
E2F3O00716 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
E2F3O00716 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
E2F3O00716 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
E2F3O00716 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
E2F3O00716 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
E2F3O00716 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
E2F3O00716 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
E2F3O00716 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
E2F3O00716 AC126755.1-201ENST00000525846 6405 ntBASIC14.99□□□□□ -0.01
E2F3O00716 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
E2F3O00716 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.99□□□□□ -0.01
E2F3O00716 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.99□□□□□ -0.01
E2F3O00716 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
E2F3O00716 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
E2F3O00716 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.99□□□□□ -0.01
E2F3O00716 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
E2F3O00716 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.99□□□□□ -0.01
E2F3O00716 AC009477.1-201ENST00000452936 217 ntBASIC14.99□□□□□ -0.01
E2F3O00716 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.99□□□□□ -0.01
E2F3O00716 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.99□□□□□ -0.01
E2F3O00716 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
E2F3O00716 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
E2F3O00716 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.99□□□□□ -0.01
E2F3O00716 AC004233.3-201ENST00000607794 1269 ntBASIC14.99□□□□□ -0.01
E2F3O00716 AL008721.1-201ENST00000609964 604 ntBASIC14.99□□□□□ -0.01
E2F3O00716 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.99□□□□□ -0.01
E2F3O00716 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.99□□□□□ -0.01
E2F3O00716 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
E2F3O00716 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
E2F3O00716 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
E2F3O00716 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.99□□□□□ -0.01
E2F3O00716 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
E2F3O00716 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
E2F3O00716 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
E2F3O00716 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
E2F3O00716 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
E2F3O00716 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
E2F3O00716 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
E2F3O00716 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
E2F3O00716 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
E2F3O00716 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.99□□□□□ -0.01
E2F3O00716 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
E2F3O00716 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
E2F3O00716 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
E2F3O00716 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.99□□□□□ -0.01
E2F3O00716 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
E2F3O00716 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.98□□□□□ -0.01
E2F3O00716 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
E2F3O00716 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
E2F3O00716 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
E2F3O00716 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
E2F3O00716 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.98□□□□□ -0.01
E2F3O00716 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
E2F3O00716 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
E2F3O00716 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
E2F3O00716 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.98□□□□□ -0.01
E2F3O00716 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.98□□□□□ -0.01
E2F3O00716 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.98□□□□□ -0.01
E2F3O00716 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.98□□□□□ -0.01
E2F3O00716 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
E2F3O00716 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.98□□□□□ -0.01
E2F3O00716 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
E2F3O00716 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
E2F3O00716 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
E2F3O00716 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
E2F3O00716 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
E2F3O00716 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.98□□□□□ -0.01
E2F3O00716 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.98□□□□□ -0.01
E2F3O00716 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
E2F3O00716 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
E2F3O00716 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms