Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC11.34□□□□□ -0.59
NACAE9PAV3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC11.34□□□□□ -0.59
NACAE9PAV3 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NACAE9PAV3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
NACAE9PAV3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
NACAE9PAV3 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
NACAE9PAV3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
NACAE9PAV3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.59
NACAE9PAV3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC11.33□□□□□ -0.6
NACAE9PAV3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC11.33□□□□□ -0.6
NACAE9PAV3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
NACAE9PAV3 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
NACAE9PAV3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NACAE9PAV3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NACAE9PAV3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC11.33□□□□□ -0.6
NACAE9PAV3 ZBTB45P2-201ENST00000452245 1531 ntBASIC11.33□□□□□ -0.6
NACAE9PAV3 KRT8P12-202ENST00000472924 1397 ntBASIC11.33□□□□□ -0.6
NACAE9PAV3 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
NACAE9PAV3 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NACAE9PAV3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NACAE9PAV3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NACAE9PAV3 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NACAE9PAV3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NACAE9PAV3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NACAE9PAV3 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NACAE9PAV3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NACAE9PAV3 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
NACAE9PAV3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NACAE9PAV3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NACAE9PAV3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC11.33□□□□□ -0.6
NACAE9PAV3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NACAE9PAV3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
NACAE9PAV3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NACAE9PAV3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC11.33□□□□□ -0.6
NACAE9PAV3 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
NACAE9PAV3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NACAE9PAV3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC11.33□□□□□ -0.6
NACAE9PAV3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC11.33□□□□□ -0.6
NACAE9PAV3 FAM207CP-201ENST00000443486 507 ntBASIC11.33□□□□□ -0.6
NACAE9PAV3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC11.33□□□□□ -0.6
NACAE9PAV3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC11.33□□□□□ -0.6
NACAE9PAV3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
NACAE9PAV3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC11.33□□□□□ -0.6
NACAE9PAV3 AC003101.2-201ENST00000612557 442 ntBASIC11.33□□□□□ -0.6
NACAE9PAV3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NACAE9PAV3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC11.33□□□□□ -0.6
NACAE9PAV3 GSN-215ENST00000545652 2428 ntTSL 2 BASIC11.33□□□□□ -0.6
NACAE9PAV3 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NACAE9PAV3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC11.33□□□□□ -0.6
NACAE9PAV3 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
NACAE9PAV3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC11.33□□□□□ -0.6
NACAE9PAV3 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NACAE9PAV3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC11.33□□□□□ -0.6
NACAE9PAV3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC11.33□□□□□ -0.6
NACAE9PAV3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC11.33□□□□□ -0.6
NACAE9PAV3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC11.33□□□□□ -0.6
NACAE9PAV3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC11.33□□□□□ -0.6
NACAE9PAV3 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
NACAE9PAV3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NACAE9PAV3 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NACAE9PAV3 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
NACAE9PAV3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
NACAE9PAV3 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
NACAE9PAV3 AC087481.3-201ENST00000602886 1894 ntBASIC11.33□□□□□ -0.6
NACAE9PAV3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
NACAE9PAV3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NACAE9PAV3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NACAE9PAV3 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
NACAE9PAV3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
NACAE9PAV3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NACAE9PAV3 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC11.33□□□□□ -0.6
NACAE9PAV3 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
NACAE9PAV3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NACAE9PAV3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC11.33□□□□□ -0.6
NACAE9PAV3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NACAE9PAV3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC11.33□□□□□ -0.6
NACAE9PAV3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
NACAE9PAV3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
NACAE9PAV3 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NACAE9PAV3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC11.32□□□□□ -0.6
NACAE9PAV3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
NACAE9PAV3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
NACAE9PAV3 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NACAE9PAV3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
NACAE9PAV3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NACAE9PAV3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NACAE9PAV3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC11.32□□□□□ -0.6
NACAE9PAV3 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC11.32□□□□□ -0.6
NACAE9PAV3 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC11.32□□□□□ -0.6
NACAE9PAV3 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NACAE9PAV3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC11.32□□□□□ -0.6
NACAE9PAV3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC11.32□□□□□ -0.6
NACAE9PAV3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NACAE9PAV3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NACAE9PAV3 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
NACAE9PAV3 AC106881.1-201ENST00000605849 3329 ntBASIC11.32□□□□□ -0.6
NACAE9PAV3 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NACAE9PAV3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NACAE9PAV3 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NACAE9PAV3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms