Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 ZBED1P1-201ENST00000502364 1930 ntBASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 TSPY16P-201ENST00000449843 468 ntBASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 RN7SL399P-201ENST00000471648 279 ntBASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 SERBP1P5-201ENST00000510079 1181 ntBASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 AC011467.4-201ENST00000594891 528 ntBASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM6-TRIM34B2RNG4 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 AC007686.3-201ENST00000619017 3487 ntBASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 AC009118.2-201ENST00000613275 655 ntBASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 AJ011932.1-201ENST00000621707 465 ntBASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 REXO1L4P-201ENST00000605109 1937 ntBASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 REXO1L2P-201ENST00000425429 2069 ntBASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM6-TRIM34B2RNG4 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TRIM6-TRIM34B2RNG4 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM6-TRIM34B2RNG4 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM6-TRIM34B2RNG4 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM6-TRIM34B2RNG4 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM6-TRIM34B2RNG4 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM6-TRIM34B2RNG4 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM6-TRIM34B2RNG4 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TRIM6-TRIM34B2RNG4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM6-TRIM34B2RNG4 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRIM6-TRIM34B2RNG4 AL365209.1-201ENST00000624418 6473 ntBASIC18.79■□□□□ 0.6
TRIM6-TRIM34B2RNG4 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms