Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RCCD1A6NED2 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
RCCD1A6NED2 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RCCD1A6NED2 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RCCD1A6NED2 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RCCD1A6NED2 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC16.32■□□□□ 0.2
RCCD1A6NED2 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.32■□□□□ 0.2
RCCD1A6NED2 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.32■□□□□ 0.2
RCCD1A6NED2 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.32■□□□□ 0.2
RCCD1A6NED2 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RCCD1A6NED2 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.32■□□□□ 0.2
RCCD1A6NED2 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.32■□□□□ 0.2
RCCD1A6NED2 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.32■□□□□ 0.2
RCCD1A6NED2 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RCCD1A6NED2 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RCCD1A6NED2 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.32■□□□□ 0.2
RCCD1A6NED2 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.32■□□□□ 0.2
RCCD1A6NED2 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RCCD1A6NED2 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RCCD1A6NED2 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RCCD1A6NED2 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RCCD1A6NED2 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RCCD1A6NED2 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.32■□□□□ 0.2
RCCD1A6NED2 AC092135.3-201ENST00000624151 1846 ntBASIC16.32■□□□□ 0.2
RCCD1A6NED2 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RCCD1A6NED2 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RCCD1A6NED2 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RCCD1A6NED2 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RCCD1A6NED2 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RCCD1A6NED2 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RCCD1A6NED2 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RCCD1A6NED2 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16.31■□□□□ 0.2
RCCD1A6NED2 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.31■□□□□ 0.2
RCCD1A6NED2 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
RCCD1A6NED2 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.31■□□□□ 0.2
RCCD1A6NED2 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RCCD1A6NED2 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RCCD1A6NED2 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RCCD1A6NED2 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RCCD1A6NED2 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RCCD1A6NED2 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RCCD1A6NED2 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RCCD1A6NED2 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RCCD1A6NED2 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RCCD1A6NED2 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.31■□□□□ 0.2
RCCD1A6NED2 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.31■□□□□ 0.2
RCCD1A6NED2 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.31■□□□□ 0.2
RCCD1A6NED2 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.31■□□□□ 0.2
RCCD1A6NED2 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RCCD1A6NED2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.31■□□□□ 0.2
RCCD1A6NED2 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC16.31■□□□□ 0.2
RCCD1A6NED2 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RCCD1A6NED2 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.31■□□□□ 0.2
RCCD1A6NED2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.31■□□□□ 0.2
RCCD1A6NED2 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.31■□□□□ 0.2
RCCD1A6NED2 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.31■□□□□ 0.2
RCCD1A6NED2 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.31■□□□□ 0.2
RCCD1A6NED2 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RCCD1A6NED2 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RCCD1A6NED2 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RCCD1A6NED2 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RCCD1A6NED2 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RCCD1A6NED2 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RCCD1A6NED2 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.3■□□□□ 0.2
RCCD1A6NED2 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.3■□□□□ 0.2
RCCD1A6NED2 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.3■□□□□ 0.2
RCCD1A6NED2 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RCCD1A6NED2 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RCCD1A6NED2 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RCCD1A6NED2 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RCCD1A6NED2 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RCCD1A6NED2 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RCCD1A6NED2 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RCCD1A6NED2 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RCCD1A6NED2 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RCCD1A6NED2 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RCCD1A6NED2 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.3■□□□□ 0.2
RCCD1A6NED2 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RCCD1A6NED2 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RCCD1A6NED2 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.3■□□□□ 0.2
RCCD1A6NED2 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RCCD1A6NED2 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RCCD1A6NED2 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RCCD1A6NED2 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
RCCD1A6NED2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.3■□□□□ 0.2
RCCD1A6NED2 KRT18P43-201ENST00000469825 1281 ntBASIC16.3■□□□□ 0.2
RCCD1A6NED2 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.3■□□□□ 0.2
RCCD1A6NED2 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.3■□□□□ 0.2
RCCD1A6NED2 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RCCD1A6NED2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.3■□□□□ 0.2
RCCD1A6NED2 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.3■□□□□ 0.2
RCCD1A6NED2 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RCCD1A6NED2 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RCCD1A6NED2 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RCCD1A6NED2 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.3■□□□□ 0.2
RCCD1A6NED2 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RCCD1A6NED2 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RCCD1A6NED2 CETN4P-206ENST00000642099 2168 ntBASIC16.3■□□□□ 0.2
RCCD1A6NED2 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC16.3■□□□□ 0.2
RCCD1A6NED2 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 287.8 ms