Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 GPR182-203ENST00000622922 591 ntBASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 AL118508.1-201ENST00000613502 2345 ntBASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.72■□□□□ 0.43
CTDP1Q9Y5B0 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 AC243960.2-201ENST00000600996 747 ntBASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 ECM1P1-201ENST00000604092 1279 ntBASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 AL158070.2-201ENST00000623713 1621 ntBASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 AC148477.4-201ENST00000613430 1793 ntBASIC17.71■□□□□ 0.43
CTDP1Q9Y5B0 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.71■□□□□ 0.42
CTDP1Q9Y5B0 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
CTDP1Q9Y5B0 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.71■□□□□ 0.42
CTDP1Q9Y5B0 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CTDP1Q9Y5B0 PCDHB19P-201ENST00000570871 2371 ntBASIC17.71■□□□□ 0.42
CTDP1Q9Y5B0 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTDP1Q9Y5B0 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTDP1Q9Y5B0 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.7■□□□□ 0.42
CTDP1Q9Y5B0 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
CTDP1Q9Y5B0 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.7■□□□□ 0.42
CTDP1Q9Y5B0 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTDP1Q9Y5B0 KRT8P44-201ENST00000441609 1350 ntBASIC17.7■□□□□ 0.42
CTDP1Q9Y5B0 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTDP1Q9Y5B0 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTDP1Q9Y5B0 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTDP1Q9Y5B0 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTDP1Q9Y5B0 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CTDP1Q9Y5B0 RPL5P21-201ENST00000404620 815 ntBASIC17.7■□□□□ 0.42
CTDP1Q9Y5B0 AL139094.1-201ENST00000405549 1188 ntBASIC17.7■□□□□ 0.42
CTDP1Q9Y5B0 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.7■□□□□ 0.42
CTDP1Q9Y5B0 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.7■□□□□ 0.42
CTDP1Q9Y5B0 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
CTDP1Q9Y5B0 Z93015.1-201ENST00000451718 390 ntBASIC17.7■□□□□ 0.42
CTDP1Q9Y5B0 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTDP1Q9Y5B0 AC108725.1-201ENST00000495472 409 ntBASIC17.7■□□□□ 0.42
CTDP1Q9Y5B0 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTDP1Q9Y5B0 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CTDP1Q9Y5B0 SAMD11P1-201ENST00000571429 661 ntBASIC17.7■□□□□ 0.42
CTDP1Q9Y5B0 RN7SL48P-201ENST00000579283 293 ntBASIC17.7■□□□□ 0.42
CTDP1Q9Y5B0 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTDP1Q9Y5B0 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.7■□□□□ 0.42
CTDP1Q9Y5B0 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.7■□□□□ 0.42
CTDP1Q9Y5B0 AC006453.4-201ENST00000636949 1252 ntBASIC17.7■□□□□ 0.42
CTDP1Q9Y5B0 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTDP1Q9Y5B0 AL513523.2-202ENST00000427283 2040 ntBASIC17.7■□□□□ 0.42
CTDP1Q9Y5B0 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms