Protein–RNA interactions for Protein: Q9Y4D8

HECTD4, Probable E3 ubiquitin-protein ligase HECTD4, humanhuman

Predictions only

Length 3,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HECTD4Q9Y4D8 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
HECTD4Q9Y4D8 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 AK6-201ENST00000380818 1183 ntTSL 2 BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 GCSHP3-201ENST00000431120 391 ntBASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 FAM90A7P-201ENST00000382628 1395 ntBASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 FAM90A23P-201ENST00000400136 1395 ntBASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 LSM5-207ENST00000410044 687 ntTSL 3 BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 AL139339.2-201ENST00000608063 657 ntBASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 NCR3-202ENST00000376071 541 ntTSL 5 BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
HECTD4Q9Y4D8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 AMT-239ENST00000636865 1914 ntTSL 5 BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 TSPY25P-201ENST00000429463 745 ntBASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 AL512306.1-201ENST00000432698 848 ntBASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
HECTD4Q9Y4D8 AC020910.5-201ENST00000623668 1865 ntBASIC9.8□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms