Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGB4Q9UN71 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGB4Q9UN71 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGB4Q9UN71 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGB4Q9UN71 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGB4Q9UN71 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.98□□□□□ -0.01
PCDHGB4Q9UN71 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGB4Q9UN71 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.98□□□□□ -0.01
PCDHGB4Q9UN71 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGB4Q9UN71 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGB4Q9UN71 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGB4Q9UN71 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.98□□□□□ -0.01
PCDHGB4Q9UN71 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 COL6A4P2-202ENST00000504443 2753 ntBASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 AC005237.2-201ENST00000434368 219 ntBASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 AC084121.4-201ENST00000641598 221 ntBASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 AF228730.8-201ENST00000642140 221 ntBASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 CICP17-201ENST00000418553 2377 ntBASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 KRT8P44-201ENST00000441609 1350 ntBASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
PCDHGB4Q9UN71 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGB4Q9UN71 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGB4Q9UN71 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGB4Q9UN71 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGB4Q9UN71 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGB4Q9UN71 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGB4Q9UN71 AC148477.4-201ENST00000613430 1793 ntBASIC14.96□□□□□ -0.01
PCDHGB4Q9UN71 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.96□□□□□ -0.01
PCDHGB4Q9UN71 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGB4Q9UN71 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGB4Q9UN71 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.96□□□□□ -0.01
PCDHGB4Q9UN71 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGB4Q9UN71 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
PCDHGB4Q9UN71 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.96□□□□□ -0.01
PCDHGB4Q9UN71 CEND1P1-201ENST00000451006 455 ntBASIC14.96□□□□□ -0.01
PCDHGB4Q9UN71 AC069335.1-201ENST00000489972 472 ntBASIC14.96□□□□□ -0.01
PCDHGB4Q9UN71 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.96□□□□□ -0.01
PCDHGB4Q9UN71 POLD2P1-201ENST00000511220 997 ntBASIC14.96□□□□□ -0.01
PCDHGB4Q9UN71 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGB4Q9UN71 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGB4Q9UN71 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGB4Q9UN71 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.96□□□□□ -0.01
PCDHGB4Q9UN71 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.96□□□□□ -0.01
PCDHGB4Q9UN71 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.96□□□□□ -0.01
PCDHGB4Q9UN71 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
PCDHGB4Q9UN71 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.96□□□□□ -0.01
PCDHGB4Q9UN71 ST20-AS1-201ENST00000560255 4223 ntBASIC14.96□□□□□ -0.01
PCDHGB4Q9UN71 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGB4Q9UN71 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGB4Q9UN71 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.96□□□□□ -0.01
PCDHGB4Q9UN71 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDHGB4Q9UN71 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
PCDHGB4Q9UN71 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
PCDHGB4Q9UN71 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.96□□□□□ -0.02
PCDHGB4Q9UN71 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PCDHGB4Q9UN71 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.02
PCDHGB4Q9UN71 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PCDHGB4Q9UN71 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
PCDHGB4Q9UN71 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.96□□□□□ -0.02
PCDHGB4Q9UN71 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.96□□□□□ -0.02
PCDHGB4Q9UN71 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms