Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 ENPP7P14-201ENST00000621765 1040 ntBASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 PPT1-215ENST00000641471 2368 ntBASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 AC007274.2-201ENST00000421675 662 ntBASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 HLA-K-203ENST00000430151 1046 ntBASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 FAM8A4P-201ENST00000435433 1213 ntBASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM7Q9NR12 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 ACTG1P2-201ENST00000415776 1125 ntBASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 ACTG1P11-201ENST00000425411 1125 ntBASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 AP000346.4-201ENST00000614827 381 ntBASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM7Q9NR12 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
PDLIM7Q9NR12 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.96■□□□□ 0.3
PDLIM7Q9NR12 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PDLIM7Q9NR12 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PDLIM7Q9NR12 AC022532.1-201ENST00000624563 1728 ntBASIC16.96■□□□□ 0.3
PDLIM7Q9NR12 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PDLIM7Q9NR12 KRT8P14-201ENST00000414254 1442 ntBASIC16.96■□□□□ 0.3
PDLIM7Q9NR12 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM7Q9NR12 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms