Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 AC132872.1-201ENST00000566986 1195 ntBASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 AC136759.1-202ENST00000530858 2194 ntBASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.89□□□□□ -0.03
TIMMDC1Q9NPL8 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 AGAP7P-201ENST00000582299 2062 ntBASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 AGAP14-201ENST00000624701 2060 ntBASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 PTENP1-202ENST00000532280 3996 ntBASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 AJ011931.1-201ENST00000618749 2492 ntBASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
TIMMDC1Q9NPL8 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TIMMDC1Q9NPL8 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TIMMDC1Q9NPL8 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.87□□□□□ -0.03
TIMMDC1Q9NPL8 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TIMMDC1Q9NPL8 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.87□□□□□ -0.03
TIMMDC1Q9NPL8 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.87□□□□□ -0.03
TIMMDC1Q9NPL8 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TIMMDC1Q9NPL8 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TIMMDC1Q9NPL8 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
TIMMDC1Q9NPL8 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.87□□□□□ -0.03
TIMMDC1Q9NPL8 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.87□□□□□ -0.03
TIMMDC1Q9NPL8 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TIMMDC1Q9NPL8 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.87□□□□□ -0.03
TIMMDC1Q9NPL8 MIR648-201ENST00000385046 94 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms