Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 AC034105.1-201ENST00000563488 319 ntBASIC18.92■□□□□ 0.62
UPF2Q9HAU5 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 AC006504.5-208ENST00000588784 2401 ntBASIC18.92■□□□□ 0.62
UPF2Q9HAU5 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 AC113367.3-201ENST00000508316 1912 ntBASIC18.92■□□□□ 0.62
UPF2Q9HAU5 AC005840.4-201ENST00000541242 2494 ntBASIC18.92■□□□□ 0.62
UPF2Q9HAU5 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UPF2Q9HAU5 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UPF2Q9HAU5 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
UPF2Q9HAU5 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
UPF2Q9HAU5 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UPF2Q9HAU5 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UPF2Q9HAU5 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.91■□□□□ 0.62
UPF2Q9HAU5 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.91■□□□□ 0.62
UPF2Q9HAU5 AC104692.2-201ENST00000603054 253 ntBASIC18.91■□□□□ 0.62
UPF2Q9HAU5 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UPF2Q9HAU5 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UPF2Q9HAU5 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UPF2Q9HAU5 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UPF2Q9HAU5 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UPF2Q9HAU5 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
UPF2Q9HAU5 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UPF2Q9HAU5 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UPF2Q9HAU5 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UPF2Q9HAU5 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UPF2Q9HAU5 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.91■□□□□ 0.62
UPF2Q9HAU5 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UPF2Q9HAU5 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UPF2Q9HAU5 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC18.91■□□□□ 0.62
UPF2Q9HAU5 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 DMBT1P1-203ENST00000636837 4628 ntBASIC18.9■□□□□ 0.62
UPF2Q9HAU5 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.9■□□□□ 0.62
UPF2Q9HAU5 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.9■□□□□ 0.62
UPF2Q9HAU5 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPF2Q9HAU5 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
UPF2Q9HAU5 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
UPF2Q9HAU5 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
UPF2Q9HAU5 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 AC027601.5-201ENST00000624065 2482 ntBASIC18.89■□□□□ 0.61
UPF2Q9HAU5 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 SPDYE11-202ENST00000450699 704 ntBASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms