Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
POLR2J2Q9GZM3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
POLR2J2Q9GZM3 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
POLR2J2Q9GZM3 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.27□□□□□ -0.13
POLR2J2Q9GZM3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
POLR2J2Q9GZM3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
POLR2J2Q9GZM3 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
POLR2J2Q9GZM3 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.27□□□□□ -0.13
POLR2J2Q9GZM3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.27□□□□□ -0.13
POLR2J2Q9GZM3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
POLR2J2Q9GZM3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 AC117489.1-201ENST00000625169 3217 ntBASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 AL671883.3-201ENST00000603274 991 ntBASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 AL589739.1-201ENST00000607720 493 ntBASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 MIR6080-201ENST00000617359 66 ntBASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.26□□□□□ -0.13
POLR2J2Q9GZM3 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 AL080243.2-201ENST00000418783 582 ntBASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 MIR4453-201ENST00000584019 89 ntBASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 AL033527.5-202ENST00000641632 1098 ntBASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.25□□□□□ -0.13
POLR2J2Q9GZM3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms