Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.83■□□□□ 0.44
CHAMP1Q96JM3 SNHG9-202ENST00000564014 471 ntBASIC17.83■□□□□ 0.44
CHAMP1Q96JM3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHAMP1Q96JM3 AC025181.2-201ENST00000606994 802 ntBASIC17.83■□□□□ 0.44
CHAMP1Q96JM3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHAMP1Q96JM3 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHAMP1Q96JM3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CHAMP1Q96JM3 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CHAMP1Q96JM3 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHAMP1Q96JM3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHAMP1Q96JM3 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CHAMP1Q96JM3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHAMP1Q96JM3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHAMP1Q96JM3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC17.83■□□□□ 0.44
CHAMP1Q96JM3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CHAMP1Q96JM3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.83■□□□□ 0.44
CHAMP1Q96JM3 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CHAMP1Q96JM3 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHAMP1Q96JM3 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHAMP1Q96JM3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CHAMP1Q96JM3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHAMP1Q96JM3 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CHAMP1Q96JM3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 AL157414.3-201ENST00000624276 1954 ntBASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 MIR770-201ENST00000390219 98 ntBASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 AC015910.1-201ENST00000579400 975 ntBASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHAMP1Q96JM3 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 FO393414.2-201ENST00000405153 598 ntBASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 AL079307.3-201ENST00000556114 283 ntBASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 MIR4469-201ENST00000583919 79 ntBASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 156.6 ms