Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CPNE2Q96FN4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CPNE2Q96FN4 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CPNE2Q96FN4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CPNE2Q96FN4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CPNE2Q96FN4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CPNE2Q96FN4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CPNE2Q96FN4 AZGP1P1-201ENST00000411909 902 ntBASIC13.44□□□□□ -0.26
CPNE2Q96FN4 SPDYE17-201ENST00000412399 783 ntBASIC13.44□□□□□ -0.26
CPNE2Q96FN4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.44□□□□□ -0.26
CPNE2Q96FN4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
CPNE2Q96FN4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.44□□□□□ -0.26
CPNE2Q96FN4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CPNE2Q96FN4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CPNE2Q96FN4 ALG1L8P-201ENST00000533887 760 ntBASIC13.44□□□□□ -0.26
CPNE2Q96FN4 AC011467.4-201ENST00000594891 528 ntBASIC13.44□□□□□ -0.26
CPNE2Q96FN4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CPNE2Q96FN4 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CPNE2Q96FN4 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.44□□□□□ -0.26
CPNE2Q96FN4 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CPNE2Q96FN4 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CPNE2Q96FN4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CPNE2Q96FN4 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CPNE2Q96FN4 ELL2P1-201ENST00000413990 1906 ntBASIC13.44□□□□□ -0.26
CPNE2Q96FN4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.44□□□□□ -0.26
CPNE2Q96FN4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.44□□□□□ -0.26
CPNE2Q96FN4 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.44□□□□□ -0.26
CPNE2Q96FN4 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CPNE2Q96FN4 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CPNE2Q96FN4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CPNE2Q96FN4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CPNE2Q96FN4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.44□□□□□ -0.26
CPNE2Q96FN4 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CPNE2Q96FN4 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 AC092053.3-201ENST00000641308 4975 ntBASIC13.43□□□□□ -0.26
CPNE2Q96FN4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 ZBED1P1-201ENST00000502364 1930 ntBASIC13.43□□□□□ -0.26
CPNE2Q96FN4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 SERBP1P3-201ENST00000459980 809 ntBASIC13.43□□□□□ -0.26
CPNE2Q96FN4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 AC084364.1-201ENST00000551967 1556 ntBASIC13.43□□□□□ -0.26
CPNE2Q96FN4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 AL137784.3-201ENST00000623858 2288 ntBASIC13.43□□□□□ -0.26
CPNE2Q96FN4 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 951.7 ms