Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.69□□□□□ -0.22
RFT1Q96AA3 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.69□□□□□ -0.22
RFT1Q96AA3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
RFT1Q96AA3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.69□□□□□ -0.22
RFT1Q96AA3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.69□□□□□ -0.22
RFT1Q96AA3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.69□□□□□ -0.22
RFT1Q96AA3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.69□□□□□ -0.22
RFT1Q96AA3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.69□□□□□ -0.22
RFT1Q96AA3 BX640515.1-201ENST00000617215 977 ntBASIC13.69□□□□□ -0.22
RFT1Q96AA3 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.69□□□□□ -0.22
RFT1Q96AA3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.69□□□□□ -0.22
RFT1Q96AA3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
RFT1Q96AA3 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RFT1Q96AA3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFT1Q96AA3 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFT1Q96AA3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.69□□□□□ -0.22
RFT1Q96AA3 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFT1Q96AA3 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFT1Q96AA3 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFT1Q96AA3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFT1Q96AA3 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFT1Q96AA3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RFT1Q96AA3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RFT1Q96AA3 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.69□□□□□ -0.22
RFT1Q96AA3 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RFT1Q96AA3 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFT1Q96AA3 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RFT1Q96AA3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.69□□□□□ -0.22
RFT1Q96AA3 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
RFT1Q96AA3 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFT1Q96AA3 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RFT1Q96AA3 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RFT1Q96AA3 MIR193BHG-211ENST00000641433 5365 ntBASIC13.68□□□□□ -0.22
RFT1Q96AA3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.68□□□□□ -0.22
RFT1Q96AA3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFT1Q96AA3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
RFT1Q96AA3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.68□□□□□ -0.22
RFT1Q96AA3 AKAP8P1-201ENST00000434743 1349 ntBASIC13.68□□□□□ -0.22
RFT1Q96AA3 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFT1Q96AA3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.68□□□□□ -0.22
RFT1Q96AA3 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RFT1Q96AA3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFT1Q96AA3 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RFT1Q96AA3 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFT1Q96AA3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFT1Q96AA3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFT1Q96AA3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RFT1Q96AA3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RFT1Q96AA3 AL136982.4-201ENST00000437689 1740 ntBASIC13.68□□□□□ -0.22
RFT1Q96AA3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFT1Q96AA3 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFT1Q96AA3 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFT1Q96AA3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFT1Q96AA3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFT1Q96AA3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.68□□□□□ -0.22
RFT1Q96AA3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.68□□□□□ -0.22
RFT1Q96AA3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.68□□□□□ -0.22
RFT1Q96AA3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.68□□□□□ -0.22
RFT1Q96AA3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFT1Q96AA3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.68□□□□□ -0.22
RFT1Q96AA3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.68□□□□□ -0.22
RFT1Q96AA3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.68□□□□□ -0.22
RFT1Q96AA3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.68□□□□□ -0.22
RFT1Q96AA3 FAM197Y3-203ENST00000618346 717 ntBASIC13.68□□□□□ -0.22
RFT1Q96AA3 AC008267.7-201ENST00000624570 1194 ntBASIC13.68□□□□□ -0.22
RFT1Q96AA3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.68□□□□□ -0.22
RFT1Q96AA3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.68□□□□□ -0.22
RFT1Q96AA3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFT1Q96AA3 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFT1Q96AA3 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFT1Q96AA3 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RFT1Q96AA3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.68□□□□□ -0.22
RFT1Q96AA3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFT1Q96AA3 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
RFT1Q96AA3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RFT1Q96AA3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFT1Q96AA3 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFT1Q96AA3 MBLAC2-202ENST00000514906 1936 ntBASIC13.68□□□□□ -0.22
RFT1Q96AA3 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFT1Q96AA3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.68□□□□□ -0.22
RFT1Q96AA3 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFT1Q96AA3 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFT1Q96AA3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFT1Q96AA3 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RFT1Q96AA3 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
RFT1Q96AA3 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RFT1Q96AA3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFT1Q96AA3 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFT1Q96AA3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFT1Q96AA3 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RFT1Q96AA3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFT1Q96AA3 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFT1Q96AA3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFT1Q96AA3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.67□□□□□ -0.22
RFT1Q96AA3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.67□□□□□ -0.22
RFT1Q96AA3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RFT1Q96AA3 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFT1Q96AA3 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFT1Q96AA3 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFT1Q96AA3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms