Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 AL606495.2-201ENST00000605867 535 ntBASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 CICP11-201ENST00000434745 2827 ntBASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 AL138709.1-201ENST00000614840 1693 ntBASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP6V0A1Q93050 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 AC243960.2-201ENST00000600996 747 ntBASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 KRT8P14-201ENST00000414254 1442 ntBASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.12■□□□□ 0.33
ATP6V0A1Q93050 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP6V0A1Q93050 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms