Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TTC9Q92623 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TTC9Q92623 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.67□□□□□ -0.06
TTC9Q92623 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.67□□□□□ -0.06
TTC9Q92623 AC120045.2-201ENST00000567334 178 ntBASIC14.67□□□□□ -0.06
TTC9Q92623 AP001063.1-201ENST00000568332 529 ntBASIC14.67□□□□□ -0.06
TTC9Q92623 GNRHR2-203ENST00000581100 1187 ntBASIC14.67□□□□□ -0.06
TTC9Q92623 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.67□□□□□ -0.06
TTC9Q92623 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
TTC9Q92623 U62317.3-201ENST00000608319 855 ntBASIC14.67□□□□□ -0.06
TTC9Q92623 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.67□□□□□ -0.06
TTC9Q92623 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TTC9Q92623 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TTC9Q92623 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TTC9Q92623 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TTC9Q92623 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TTC9Q92623 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.67□□□□□ -0.06
TTC9Q92623 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TTC9Q92623 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.67□□□□□ -0.06
TTC9Q92623 SNX18-202ENST00000343017 3140 ntBASIC14.67□□□□□ -0.06
TTC9Q92623 REXO1L1P-202ENST00000608646 1974 ntBASIC14.67□□□□□ -0.06
TTC9Q92623 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TTC9Q92623 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TTC9Q92623 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TTC9Q92623 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TTC9Q92623 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TTC9Q92623 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TTC9Q92623 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TTC9Q92623 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.67□□□□□ -0.06
TTC9Q92623 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC9Q92623 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.66□□□□□ -0.06
TTC9Q92623 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TTC9Q92623 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.66□□□□□ -0.06
TTC9Q92623 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.66□□□□□ -0.06
TTC9Q92623 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC9Q92623 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC9Q92623 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC9Q92623 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC9Q92623 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
TTC9Q92623 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC9Q92623 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC9Q92623 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.66□□□□□ -0.06
TTC9Q92623 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TTC9Q92623 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TTC9Q92623 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TTC9Q92623 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC9Q92623 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC9Q92623 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TTC9Q92623 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC9Q92623 CNN2P8-201ENST00000421872 913 ntBASIC14.66□□□□□ -0.06
TTC9Q92623 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.66□□□□□ -0.06
TTC9Q92623 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.66□□□□□ -0.06
TTC9Q92623 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.66□□□□□ -0.06
TTC9Q92623 BX284668.4-201ENST00000453917 508 ntBASIC14.66□□□□□ -0.06
TTC9Q92623 AC093433.1-201ENST00000458048 571 ntBASIC14.66□□□□□ -0.06
TTC9Q92623 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TTC9Q92623 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.66□□□□□ -0.06
TTC9Q92623 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TTC9Q92623 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
TTC9Q92623 AL450472.2-201ENST00000603663 1156 ntBASIC14.66□□□□□ -0.06
TTC9Q92623 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC9Q92623 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
TTC9Q92623 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
TTC9Q92623 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC9Q92623 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC9Q92623 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC9Q92623 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC9Q92623 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TTC9Q92623 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC9Q92623 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC9Q92623 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TTC9Q92623 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC9Q92623 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TTC9Q92623 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TTC9Q92623 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
TTC9Q92623 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TTC9Q92623 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.65□□□□□ -0.06
TTC9Q92623 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
TTC9Q92623 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TTC9Q92623 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TTC9Q92623 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TTC9Q92623 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TTC9Q92623 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TTC9Q92623 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TTC9Q92623 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.65□□□□□ -0.06
TTC9Q92623 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TTC9Q92623 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TTC9Q92623 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TTC9Q92623 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TTC9Q92623 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.65□□□□□ -0.06
TTC9Q92623 AC112504.1-201ENST00000623415 1841 ntBASIC14.65□□□□□ -0.06
TTC9Q92623 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TTC9Q92623 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TTC9Q92623 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
TTC9Q92623 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TTC9Q92623 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TTC9Q92623 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TTC9Q92623 BTBD6P1-201ENST00000412176 1267 ntBASIC14.65□□□□□ -0.06
TTC9Q92623 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.65□□□□□ -0.06
TTC9Q92623 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms