Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.6■□□□□ 0.09
SHROOM3Q8TF72 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.6■□□□□ 0.09
SHROOM3Q8TF72 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.6■□□□□ 0.09
SHROOM3Q8TF72 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SHROOM3Q8TF72 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SHROOM3Q8TF72 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SHROOM3Q8TF72 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
SHROOM3Q8TF72 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SHROOM3Q8TF72 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 AC093433.1-201ENST00000458048 571 ntBASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 AC023090.2-201ENST00000625182 2110 ntBASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHROOM3Q8TF72 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
SHROOM3Q8TF72 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.09
SHROOM3Q8TF72 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.58■□□□□ 0.09
SHROOM3Q8TF72 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
SHROOM3Q8TF72 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.58■□□□□ 0.09
SHROOM3Q8TF72 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.58■□□□□ 0.09
SHROOM3Q8TF72 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SHROOM3Q8TF72 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.58■□□□□ 0.09
SHROOM3Q8TF72 TTTY23B-201ENST00000442790 549 ntBASIC15.58■□□□□ 0.09
SHROOM3Q8TF72 FTH1P14-201ENST00000482930 551 ntBASIC15.58■□□□□ 0.09
SHROOM3Q8TF72 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SHROOM3Q8TF72 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.58■□□□□ 0.09
SHROOM3Q8TF72 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.58■□□□□ 0.09
SHROOM3Q8TF72 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.58■□□□□ 0.09
SHROOM3Q8TF72 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SHROOM3Q8TF72 AC013726.1-201ENST00000563747 2285 ntBASIC15.58■□□□□ 0.09
SHROOM3Q8TF72 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SHROOM3Q8TF72 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHROOM3Q8TF72 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
SHROOM3Q8TF72 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.58■□□□□ 0.08
SHROOM3Q8TF72 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHROOM3Q8TF72 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SHROOM3Q8TF72 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHROOM3Q8TF72 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHROOM3Q8TF72 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SHROOM3Q8TF72 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHROOM3Q8TF72 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SHROOM3Q8TF72 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SHROOM3Q8TF72 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHROOM3Q8TF72 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHROOM3Q8TF72 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHROOM3Q8TF72 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHROOM3Q8TF72 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
SHROOM3Q8TF72 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHROOM3Q8TF72 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SHROOM3Q8TF72 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SHROOM3Q8TF72 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.58■□□□□ 0.08
SHROOM3Q8TF72 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.58■□□□□ 0.08
SHROOM3Q8TF72 DUX4L47-201ENST00000566374 394 ntBASIC15.58■□□□□ 0.08
SHROOM3Q8TF72 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHROOM3Q8TF72 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.08
SHROOM3Q8TF72 REXO1L5P-201ENST00000622260 2098 ntBASIC15.58■□□□□ 0.08
SHROOM3Q8TF72 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms