Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 ACKR1-201ENST00000368121 1240 ntBASIC16.36■□□□□ 0.21
LMO3Q8TAP4 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 KLF2P2-201ENST00000416807 1039 ntBASIC16.36■□□□□ 0.21
LMO3Q8TAP4 EIF3FP3-201ENST00000434851 1086 ntBASIC16.36■□□□□ 0.21
LMO3Q8TAP4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 AC114812.1-204ENST00000449669 728 ntBASIC16.36■□□□□ 0.21
LMO3Q8TAP4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 ENPP7P5-201ENST00000541031 1031 ntBASIC16.36■□□□□ 0.21
LMO3Q8TAP4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 CRB3P1-201ENST00000449338 276 ntBASIC16.35■□□□□ 0.21
LMO3Q8TAP4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 TERF1P3-201ENST00000505638 1227 ntBASIC16.35■□□□□ 0.21
LMO3Q8TAP4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 AP005019.2-201ENST00000615104 511 ntBASIC16.35■□□□□ 0.21
LMO3Q8TAP4 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 AC005912.2-201ENST00000619492 2400 ntBASIC16.35■□□□□ 0.21
LMO3Q8TAP4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.35■□□□□ 0.21
LMO3Q8TAP4 AC007191.1-201ENST00000623179 2995 ntBASIC16.35■□□□□ 0.21
LMO3Q8TAP4 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LMO3Q8TAP4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms