Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.36□□□□□ -0.27
BEST4Q8NFU0 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
BEST4Q8NFU0 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 FAM8A3P-201ENST00000427218 844 ntBASIC13.35□□□□□ -0.27
BEST4Q8NFU0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 AC096734.2-201ENST00000562054 433 ntBASIC13.35□□□□□ -0.27
BEST4Q8NFU0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 AC024267.1-201ENST00000582320 895 ntBASIC13.35□□□□□ -0.27
BEST4Q8NFU0 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 AC010507.1-201ENST00000633895 436 ntBASIC13.35□□□□□ -0.27
BEST4Q8NFU0 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BEST4Q8NFU0 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
BEST4Q8NFU0 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.34□□□□□ -0.27
BEST4Q8NFU0 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BEST4Q8NFU0 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
BEST4Q8NFU0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.34□□□□□ -0.27
BEST4Q8NFU0 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BEST4Q8NFU0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
BEST4Q8NFU0 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BEST4Q8NFU0 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
BEST4Q8NFU0 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
BEST4Q8NFU0 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
BEST4Q8NFU0 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.34□□□□□ -0.27
BEST4Q8NFU0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
BEST4Q8NFU0 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
BEST4Q8NFU0 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
BEST4Q8NFU0 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.34□□□□□ -0.27
BEST4Q8NFU0 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BEST4Q8NFU0 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BEST4Q8NFU0 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
BEST4Q8NFU0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BEST4Q8NFU0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.34□□□□□ -0.27
BEST4Q8NFU0 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.34□□□□□ -0.27
BEST4Q8NFU0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.34□□□□□ -0.27
BEST4Q8NFU0 RHOQP3-201ENST00000437982 621 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms