Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00311Q8N616 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00311Q8N616 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.42□□□□□ -0.42
LINC00311Q8N616 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00311Q8N616 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00311Q8N616 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00311Q8N616 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00311Q8N616 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00311Q8N616 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00311Q8N616 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00311Q8N616 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00311Q8N616 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00311Q8N616 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00311Q8N616 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00311Q8N616 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00311Q8N616 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.42□□□□□ -0.42
LINC00311Q8N616 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.42□□□□□ -0.42
LINC00311Q8N616 AL162726.2-201ENST00000438986 1017 ntBASIC12.42□□□□□ -0.42
LINC00311Q8N616 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.42□□□□□ -0.42
LINC00311Q8N616 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00311Q8N616 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.42□□□□□ -0.42
LINC00311Q8N616 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.42□□□□□ -0.42
LINC00311Q8N616 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC12.42□□□□□ -0.42
LINC00311Q8N616 TP53TG3HP-202ENST00000569755 579 ntBASIC12.42□□□□□ -0.42
LINC00311Q8N616 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
LINC00311Q8N616 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00311Q8N616 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.42□□□□□ -0.42
LINC00311Q8N616 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.42□□□□□ -0.42
LINC00311Q8N616 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00311Q8N616 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
LINC00311Q8N616 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC12.42□□□□□ -0.42
LINC00311Q8N616 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00311Q8N616 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
LINC00311Q8N616 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00311Q8N616 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00311Q8N616 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00311Q8N616 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00311Q8N616 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LINC00311Q8N616 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00311Q8N616 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00311Q8N616 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00311Q8N616 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00311Q8N616 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00311Q8N616 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00311Q8N616 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00311Q8N616 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00311Q8N616 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00311Q8N616 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00311Q8N616 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00311Q8N616 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00311Q8N616 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
LINC00311Q8N616 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00311Q8N616 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00311Q8N616 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC00311Q8N616 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00311Q8N616 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00311Q8N616 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00311Q8N616 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00311Q8N616 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00311Q8N616 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
LINC00311Q8N616 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00311Q8N616 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00311Q8N616 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
LINC00311Q8N616 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00311Q8N616 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
LINC00311Q8N616 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
LINC00311Q8N616 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00311Q8N616 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.41□□□□□ -0.42
LINC00311Q8N616 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00311Q8N616 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00311Q8N616 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00311Q8N616 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.41□□□□□ -0.42
LINC00311Q8N616 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.41□□□□□ -0.42
LINC00311Q8N616 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.41□□□□□ -0.42
LINC00311Q8N616 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
LINC00311Q8N616 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
LINC00311Q8N616 DUX4L47-201ENST00000566374 394 ntBASIC12.41□□□□□ -0.42
LINC00311Q8N616 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00311Q8N616 SPDYE22P-201ENST00000582158 798 ntBASIC12.41□□□□□ -0.42
LINC00311Q8N616 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC00311Q8N616 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.41□□□□□ -0.42
LINC00311Q8N616 AP005019.2-201ENST00000615104 511 ntBASIC12.41□□□□□ -0.42
LINC00311Q8N616 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
LINC00311Q8N616 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.41□□□□□ -0.42
LINC00311Q8N616 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00311Q8N616 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00311Q8N616 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00311Q8N616 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC00311Q8N616 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC00311Q8N616 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
LINC00311Q8N616 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00311Q8N616 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC00311Q8N616 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC00311Q8N616 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC00311Q8N616 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.41□□□□□ -0.42
LINC00311Q8N616 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00311Q8N616 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
LINC00311Q8N616 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00311Q8N616 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00311Q8N616 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms