Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 CICP11-201ENST00000434745 2827 ntBASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 AC113367.3-201ENST00000508316 1912 ntBASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 ADAMTS7P1-201ENST00000613213 4793 ntBASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 PTENP1-202ENST00000532280 3996 ntBASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRIM42Q8IWZ5 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 KRT18P13-201ENST00000400056 1290 ntBASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 BX842568.4-201ENST00000421222 227 ntBASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 AC112191.1-201ENST00000523689 701 ntBASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 KRT19P2-202ENST00000557173 1012 ntBASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 AC008267.7-201ENST00000624570 1194 ntBASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 AC136759.1-202ENST00000530858 2194 ntBASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM42Q8IWZ5 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms