Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD2Q7Z408 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.58□□□□□ -0.4
CSMD2Q7Z408 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CSMD2Q7Z408 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD2Q7Z408 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
CSMD2Q7Z408 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 GDNF-207ENST00000515058 764 ntTSL 5 BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 Z69890.1-201ENST00000382990 339 ntBASIC12.57□□□□□ -0.4
CSMD2Q7Z408 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 IGHEP1-201ENST00000521393 651 ntBASIC12.57□□□□□ -0.4
CSMD2Q7Z408 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 AC025183.3-201ENST00000623526 1482 ntBASIC12.57□□□□□ -0.4
CSMD2Q7Z408 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CSMD2Q7Z408 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 AL512306.1-201ENST00000432698 848 ntBASIC12.56□□□□□ -0.4
CSMD2Q7Z408 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 AC023141.7-201ENST00000430646 407 ntBASIC12.56□□□□□ -0.4
CSMD2Q7Z408 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 AC006122.1-201ENST00000493323 440 ntBASIC12.56□□□□□ -0.4
CSMD2Q7Z408 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD2Q7Z408 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms