Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTF1AQ7RTS3 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PTF1AQ7RTS3 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC19.25■□□□□ 0.67
PTF1AQ7RTS3 DUTP3-201ENST00000450025 415 ntBASIC19.25■□□□□ 0.67
PTF1AQ7RTS3 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC19.25■□□□□ 0.67
PTF1AQ7RTS3 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC19.25■□□□□ 0.67
PTF1AQ7RTS3 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTF1AQ7RTS3 ORAOV1P1-201ENST00000503108 395 ntBASIC19.25■□□□□ 0.67
PTF1AQ7RTS3 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC19.25■□□□□ 0.67
PTF1AQ7RTS3 FAM86KP-201ENST00000509817 987 ntBASIC19.25■□□□□ 0.67
PTF1AQ7RTS3 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC19.25■□□□□ 0.67
PTF1AQ7RTS3 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC19.25■□□□□ 0.67
PTF1AQ7RTS3 AC093752.3-201ENST00000567343 901 ntBASIC19.25■□□□□ 0.67
PTF1AQ7RTS3 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC19.25■□□□□ 0.67
PTF1AQ7RTS3 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC19.25■□□□□ 0.67
PTF1AQ7RTS3 AC087392.5-201ENST00000612517 489 ntBASIC19.25■□□□□ 0.67
PTF1AQ7RTS3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.25■□□□□ 0.67
PTF1AQ7RTS3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTF1AQ7RTS3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTF1AQ7RTS3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PTF1AQ7RTS3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PTF1AQ7RTS3 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTF1AQ7RTS3 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTF1AQ7RTS3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTF1AQ7RTS3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PTF1AQ7RTS3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PTF1AQ7RTS3 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTF1AQ7RTS3 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 REXO1L2P-201ENST00000425429 2069 ntBASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 SKA2-202ENST00000437036 625 ntTSL 2 BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 MT3-203ENST00000565838 421 ntTSL 3 BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 PLS3-210ENST00000626746 216 ntTSL 4 BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 AC002472.4-201ENST00000641915 272 ntBASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTF1AQ7RTS3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PTF1AQ7RTS3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
PTF1AQ7RTS3 ZBTB45P1-201ENST00000452761 1456 ntBASIC19.23■□□□□ 0.67
PTF1AQ7RTS3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTF1AQ7RTS3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTF1AQ7RTS3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.23■□□□□ 0.67
PTF1AQ7RTS3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.23■□□□□ 0.67
PTF1AQ7RTS3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTF1AQ7RTS3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PTF1AQ7RTS3 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTF1AQ7RTS3 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTF1AQ7RTS3 STK16-203ENST00000409516 895 ntTSL 2 BASIC19.23■□□□□ 0.67
PTF1AQ7RTS3 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTF1AQ7RTS3 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC19.23■□□□□ 0.67
PTF1AQ7RTS3 AC024293.1-201ENST00000467930 498 ntBASIC19.23■□□□□ 0.67
PTF1AQ7RTS3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PTF1AQ7RTS3 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTF1AQ7RTS3 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTF1AQ7RTS3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTF1AQ7RTS3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTF1AQ7RTS3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTF1AQ7RTS3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTF1AQ7RTS3 KRT8P31-201ENST00000504812 1408 ntBASIC19.23■□□□□ 0.67
PTF1AQ7RTS3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTF1AQ7RTS3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.23■□□□□ 0.67
PTF1AQ7RTS3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PTF1AQ7RTS3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTF1AQ7RTS3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
PTF1AQ7RTS3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.23■□□□□ 0.67
PTF1AQ7RTS3 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTF1AQ7RTS3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
PTF1AQ7RTS3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTF1AQ7RTS3 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTF1AQ7RTS3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTF1AQ7RTS3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms