Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 AL603832.2-201ENST00000566195 2125 ntBASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP1BQ7LBR1 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 AC026748.1-201ENST00000624349 3251 ntBASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 AL035633.1-201ENST00000406139 838 ntBASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 AL353779.1-201ENST00000434793 351 ntBASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 AC114501.2-201ENST00000439631 535 ntBASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 PHKG1P2-201ENST00000457537 863 ntBASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 TPRX2P-201ENST00000535362 881 ntBASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 AC004461.2-201ENST00000629517 803 ntBASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 AC004840.1-201ENST00000636359 365 ntBASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHMP1BQ7LBR1 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHMP1BQ7LBR1 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHMP1BQ7LBR1 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.27□□□□□ -0.12
CHMP1BQ7LBR1 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHMP1BQ7LBR1 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHMP1BQ7LBR1 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.27□□□□□ -0.12
CHMP1BQ7LBR1 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHMP1BQ7LBR1 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.27□□□□□ -0.12
CHMP1BQ7LBR1 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHMP1BQ7LBR1 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CHMP1BQ7LBR1 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHMP1BQ7LBR1 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CHMP1BQ7LBR1 AL391825.1-201ENST00000457671 1364 ntBASIC14.27□□□□□ -0.12
CHMP1BQ7LBR1 PTENP1-202ENST00000532280 3996 ntBASIC14.27□□□□□ -0.12
CHMP1BQ7LBR1 AZGP1P1-201ENST00000411909 902 ntBASIC14.27□□□□□ -0.13
CHMP1BQ7LBR1 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.27□□□□□ -0.13
CHMP1BQ7LBR1 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.27□□□□□ -0.13
CHMP1BQ7LBR1 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.27□□□□□ -0.13
CHMP1BQ7LBR1 AC093004.1-201ENST00000508850 424 ntBASIC14.27□□□□□ -0.13
CHMP1BQ7LBR1 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHMP1BQ7LBR1 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
CHMP1BQ7LBR1 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms