Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 AC067930.6-201ENST00000623257 4947 ntBASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 SPDYE7P-202ENST00000420373 878 ntBASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 AL512356.2-201ENST00000546955 174 ntBASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 AL009183.1-201ENST00000603760 355 ntBASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 AC063926.2-201ENST00000623766 1308 ntBASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
FOXR1Q6PIV2 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 AC126365.1-201ENST00000578585 1514 ntBASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 AC140878.1-201ENST00000565277 250 ntBASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 LINC02560-201ENST00000596379 459 ntBASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 AC012645.4-201ENST00000610691 1061 ntBASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
FOXR1Q6PIV2 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms