Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RC3H1Q5TC82 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RC3H1Q5TC82 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RC3H1Q5TC82 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RC3H1Q5TC82 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RC3H1Q5TC82 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 AC006449.5-201ENST00000610658 2098 ntBASIC18.97■□□□□ 0.63
RC3H1Q5TC82 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 AC003102.2-201ENST00000589195 1469 ntBASIC18.97■□□□□ 0.63
RC3H1Q5TC82 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 AC020916.1-201ENST00000587762 1774 ntBASIC18.97■□□□□ 0.63
RC3H1Q5TC82 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 RPS9P1-201ENST00000419943 583 ntBASIC18.97■□□□□ 0.63
RC3H1Q5TC82 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 AP002803.1-201ENST00000528836 498 ntBASIC18.97■□□□□ 0.63
RC3H1Q5TC82 NAT9-220ENST00000582870 896 ntTSL 5 BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 AL109837.1-201ENST00000603272 613 ntBASIC18.97■□□□□ 0.63
RC3H1Q5TC82 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 AP001065.2-201ENST00000617205 644 ntBASIC18.97■□□□□ 0.63
RC3H1Q5TC82 MIR6769A-201ENST00000617340 73 ntBASIC18.97■□□□□ 0.63
RC3H1Q5TC82 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 AC027601.3-201ENST00000622907 509 ntBASIC18.97■□□□□ 0.63
RC3H1Q5TC82 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RC3H1Q5TC82 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC18.96■□□□□ 0.63
RC3H1Q5TC82 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RC3H1Q5TC82 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RC3H1Q5TC82 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RC3H1Q5TC82 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RC3H1Q5TC82 CICP11-201ENST00000434745 2827 ntBASIC18.96■□□□□ 0.63
RC3H1Q5TC82 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RC3H1Q5TC82 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RC3H1Q5TC82 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC18.96■□□□□ 0.63
RC3H1Q5TC82 CICP12-201ENST00000455801 843 ntBASIC18.96■□□□□ 0.63
RC3H1Q5TC82 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC18.96■□□□□ 0.63
RC3H1Q5TC82 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RC3H1Q5TC82 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC18.96■□□□□ 0.63
RC3H1Q5TC82 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC18.96■□□□□ 0.63
RC3H1Q5TC82 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC18.96■□□□□ 0.63
RC3H1Q5TC82 GMFG-209ENST00000600322 622 ntTSL 5 BASIC18.96■□□□□ 0.63
RC3H1Q5TC82 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC18.96■□□□□ 0.63
RC3H1Q5TC82 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RC3H1Q5TC82 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
RC3H1Q5TC82 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RC3H1Q5TC82 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RC3H1Q5TC82 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RC3H1Q5TC82 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
RC3H1Q5TC82 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RC3H1Q5TC82 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC18.96■□□□□ 0.63
RC3H1Q5TC82 AC105250.1-201ENST00000509378 2057 ntBASIC18.96■□□□□ 0.63
RC3H1Q5TC82 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RC3H1Q5TC82 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RC3H1Q5TC82 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 AC144522.1-201ENST00000625111 1658 ntBASIC18.95■□□□□ 0.62
RC3H1Q5TC82 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 CAP2P1-201ENST00000557743 1390 ntBASIC18.95■□□□□ 0.62
RC3H1Q5TC82 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC18.95■□□□□ 0.62
RC3H1Q5TC82 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms