Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 FO393414.2-201ENST00000405153 598 ntBASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 FAM86GP-201ENST00000448322 971 ntBASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 HLA-V-204ENST00000476601 1289 ntBASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 AC023024.2-201ENST00000623561 1993 ntBASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 AC134407.2-201ENST00000625089 1978 ntBASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 AC107890.1-201ENST00000422478 521 ntBASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 KRT8P12-202ENST00000472924 1397 ntBASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 BNIP3P1-202ENST00000550043 1585 ntBASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
ATPAF1Q5TC12 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
ATPAF1Q5TC12 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.4□□□□□ -0.27
ATPAF1Q5TC12 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms