Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VARS2Q5ST30 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
VARS2Q5ST30 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VARS2Q5ST30 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.24■□□□□ 0.19
VARS2Q5ST30 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VARS2Q5ST30 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VARS2Q5ST30 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VARS2Q5ST30 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VARS2Q5ST30 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
VARS2Q5ST30 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.24■□□□□ 0.19
VARS2Q5ST30 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.24■□□□□ 0.19
VARS2Q5ST30 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
VARS2Q5ST30 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VARS2Q5ST30 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VARS2Q5ST30 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.23■□□□□ 0.19
VARS2Q5ST30 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VARS2Q5ST30 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.23■□□□□ 0.19
VARS2Q5ST30 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VARS2Q5ST30 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VARS2Q5ST30 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
VARS2Q5ST30 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
VARS2Q5ST30 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
VARS2Q5ST30 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VARS2Q5ST30 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VARS2Q5ST30 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VARS2Q5ST30 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VARS2Q5ST30 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VARS2Q5ST30 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
VARS2Q5ST30 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
VARS2Q5ST30 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC16.23■□□□□ 0.19
VARS2Q5ST30 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VARS2Q5ST30 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.23■□□□□ 0.19
VARS2Q5ST30 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VARS2Q5ST30 Z93015.1-201ENST00000451718 390 ntBASIC16.23■□□□□ 0.19
VARS2Q5ST30 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC16.23■□□□□ 0.19
VARS2Q5ST30 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VARS2Q5ST30 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.23■□□□□ 0.19
VARS2Q5ST30 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.23■□□□□ 0.19
VARS2Q5ST30 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.23■□□□□ 0.19
VARS2Q5ST30 MIR3615-201ENST00000581999 87 ntBASIC16.23■□□□□ 0.19
VARS2Q5ST30 CSNK1A1-209ENST00000606299 1075 ntTSL 3 BASIC16.23■□□□□ 0.19
VARS2Q5ST30 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.23■□□□□ 0.19
VARS2Q5ST30 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
VARS2Q5ST30 AC040160.2-201ENST00000623816 1675 ntBASIC16.23■□□□□ 0.19
VARS2Q5ST30 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VARS2Q5ST30 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.23■□□□□ 0.19
VARS2Q5ST30 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VARS2Q5ST30 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.23■□□□□ 0.19
VARS2Q5ST30 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VARS2Q5ST30 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VARS2Q5ST30 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.23■□□□□ 0.19
VARS2Q5ST30 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
VARS2Q5ST30 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VARS2Q5ST30 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.23■□□□□ 0.19
VARS2Q5ST30 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
VARS2Q5ST30 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
VARS2Q5ST30 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARS2Q5ST30 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARS2Q5ST30 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARS2Q5ST30 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.22■□□□□ 0.19
VARS2Q5ST30 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.22■□□□□ 0.19
VARS2Q5ST30 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VARS2Q5ST30 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARS2Q5ST30 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARS2Q5ST30 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VARS2Q5ST30 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARS2Q5ST30 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARS2Q5ST30 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARS2Q5ST30 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
VARS2Q5ST30 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.22■□□□□ 0.19
VARS2Q5ST30 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARS2Q5ST30 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.22■□□□□ 0.19
VARS2Q5ST30 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARS2Q5ST30 CICP11-201ENST00000434745 2827 ntBASIC16.22■□□□□ 0.19
VARS2Q5ST30 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARS2Q5ST30 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARS2Q5ST30 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARS2Q5ST30 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VARS2Q5ST30 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
VARS2Q5ST30 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
VARS2Q5ST30 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VARS2Q5ST30 HCG24-202ENST00000414398 717 ntTSL 3 BASIC16.22■□□□□ 0.19
VARS2Q5ST30 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VARS2Q5ST30 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.22■□□□□ 0.19
VARS2Q5ST30 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARS2Q5ST30 RHOQP1-201ENST00000555758 579 ntBASIC16.22■□□□□ 0.19
VARS2Q5ST30 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.22■□□□□ 0.19
VARS2Q5ST30 AL031058.1-201ENST00000561592 888 ntBASIC16.22■□□□□ 0.19
VARS2Q5ST30 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARS2Q5ST30 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.22■□□□□ 0.19
VARS2Q5ST30 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
VARS2Q5ST30 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VARS2Q5ST30 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARS2Q5ST30 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARS2Q5ST30 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARS2Q5ST30 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARS2Q5ST30 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.22■□□□□ 0.19
VARS2Q5ST30 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARS2Q5ST30 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.22■□□□□ 0.19
VARS2Q5ST30 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms