Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH17Q12864 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.53■□□□□ 0.08
CDH17Q12864 MRPS18AP1-201ENST00000414458 589 ntBASIC15.53■□□□□ 0.08
CDH17Q12864 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH17Q12864 GAPDHP40-201ENST00000505218 1006 ntBASIC15.53■□□□□ 0.08
CDH17Q12864 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH17Q12864 RFPL4AP1-201ENST00000530883 850 ntBASIC15.53■□□□□ 0.08
CDH17Q12864 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.53■□□□□ 0.08
CDH17Q12864 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
CDH17Q12864 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH17Q12864 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH17Q12864 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH17Q12864 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH17Q12864 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH17Q12864 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH17Q12864 AC068418.2-201ENST00000577309 3703 ntBASIC15.53■□□□□ 0.08
CDH17Q12864 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH17Q12864 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH17Q12864 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH17Q12864 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH17Q12864 FAM45BP-202ENST00000592932 1624 ntBASIC15.53■□□□□ 0.08
CDH17Q12864 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH17Q12864 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH17Q12864 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH17Q12864 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH17Q12864 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH17Q12864 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
CDH17Q12864 AL359258.3-201ENST00000622910 2331 ntBASIC15.52■□□□□ 0.08
CDH17Q12864 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH17Q12864 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.52■□□□□ 0.08
CDH17Q12864 OR2I1P-209ENST00000641730 5365 ntBASIC15.52■□□□□ 0.08
CDH17Q12864 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH17Q12864 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDH17Q12864 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
CDH17Q12864 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH17Q12864 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.52■□□□□ 0.08
CDH17Q12864 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH17Q12864 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.52■□□□□ 0.08
CDH17Q12864 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.52■□□□□ 0.08
CDH17Q12864 AC092183.1-201ENST00000469884 875 ntBASIC15.52■□□□□ 0.08
CDH17Q12864 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.52■□□□□ 0.08
CDH17Q12864 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
CDH17Q12864 DOC2GP-202ENST00000514950 1163 ntBASIC15.52■□□□□ 0.08
CDH17Q12864 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDH17Q12864 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.52■□□□□ 0.08
CDH17Q12864 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.52■□□□□ 0.08
CDH17Q12864 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.52■□□□□ 0.08
CDH17Q12864 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH17Q12864 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.52■□□□□ 0.08
CDH17Q12864 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.52■□□□□ 0.08
CDH17Q12864 AC005498.2-205ENST00000593218 784 ntBASIC15.52■□□□□ 0.08
CDH17Q12864 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.52■□□□□ 0.08
CDH17Q12864 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.52■□□□□ 0.08
CDH17Q12864 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH17Q12864 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CDH17Q12864 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH17Q12864 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.52■□□□□ 0.08
CDH17Q12864 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDH17Q12864 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
CDH17Q12864 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH17Q12864 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH17Q12864 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDH17Q12864 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
CDH17Q12864 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH17Q12864 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDH17Q12864 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.52■□□□□ 0.07
CDH17Q12864 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.52■□□□□ 0.07
CDH17Q12864 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH17Q12864 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH17Q12864 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDH17Q12864 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH17Q12864 AL390755.1-201ENST00000623716 2027 ntBASIC15.51■□□□□ 0.07
CDH17Q12864 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH17Q12864 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH17Q12864 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CDH17Q12864 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH17Q12864 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CDH17Q12864 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH17Q12864 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH17Q12864 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH17Q12864 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CDH17Q12864 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CDH17Q12864 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH17Q12864 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH17Q12864 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH17Q12864 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH17Q12864 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.51■□□□□ 0.07
CDH17Q12864 PMS2P2-201ENST00000425039 1128 ntBASIC15.51■□□□□ 0.07
CDH17Q12864 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.51■□□□□ 0.07
CDH17Q12864 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH17Q12864 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.51■□□□□ 0.07
CDH17Q12864 FAM86LP-201ENST00000478302 853 ntBASIC15.51■□□□□ 0.07
CDH17Q12864 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH17Q12864 TPRX2P-201ENST00000535362 881 ntBASIC15.51■□□□□ 0.07
CDH17Q12864 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH17Q12864 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.51■□□□□ 0.07
CDH17Q12864 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.51■□□□□ 0.07
CDH17Q12864 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.51■□□□□ 0.07
CDH17Q12864 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH17Q12864 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms