Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HMGCS1Q01581 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.85□□□□□ -0.03
HMGCS1Q01581 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCS1Q01581 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.85□□□□□ -0.03
HMGCS1Q01581 AC026748.1-201ENST00000624349 3251 ntBASIC14.84□□□□□ -0.03
HMGCS1Q01581 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCS1Q01581 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
HMGCS1Q01581 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCS1Q01581 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCS1Q01581 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.84□□□□□ -0.03
HMGCS1Q01581 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCS1Q01581 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCS1Q01581 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCS1Q01581 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCS1Q01581 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
HMGCS1Q01581 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
HMGCS1Q01581 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
HMGCS1Q01581 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCS1Q01581 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.84□□□□□ -0.03
HMGCS1Q01581 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.84□□□□□ -0.03
HMGCS1Q01581 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.84□□□□□ -0.03
HMGCS1Q01581 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.84□□□□□ -0.03
HMGCS1Q01581 FAM86GP-201ENST00000448322 971 ntBASIC14.84□□□□□ -0.03
HMGCS1Q01581 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.84□□□□□ -0.03
HMGCS1Q01581 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.84□□□□□ -0.03
HMGCS1Q01581 AC097493.3-201ENST00000509725 367 ntBASIC14.84□□□□□ -0.03
HMGCS1Q01581 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.84□□□□□ -0.03
HMGCS1Q01581 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.84□□□□□ -0.03
HMGCS1Q01581 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.84□□□□□ -0.03
HMGCS1Q01581 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
HMGCS1Q01581 AC011467.4-201ENST00000594891 528 ntBASIC14.84□□□□□ -0.03
HMGCS1Q01581 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.84□□□□□ -0.03
HMGCS1Q01581 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.84□□□□□ -0.03
HMGCS1Q01581 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.84□□□□□ -0.03
HMGCS1Q01581 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.84□□□□□ -0.03
HMGCS1Q01581 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.84□□□□□ -0.03
HMGCS1Q01581 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCS1Q01581 AC087499.5-201ENST00000452760 1342 ntBASIC14.84□□□□□ -0.03
HMGCS1Q01581 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCS1Q01581 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCS1Q01581 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCS1Q01581 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCS1Q01581 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
HMGCS1Q01581 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HMGCS1Q01581 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCS1Q01581 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGCS1Q01581 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.84□□□□□ -0.03
HMGCS1Q01581 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HMGCS1Q01581 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
HMGCS1Q01581 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
HMGCS1Q01581 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
HMGCS1Q01581 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
HMGCS1Q01581 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.83□□□□□ -0.03
HMGCS1Q01581 AC138969.3-201ENST00000546612 1459 ntBASIC14.83□□□□□ -0.03
HMGCS1Q01581 AC138932.2-201ENST00000548268 1459 ntBASIC14.83□□□□□ -0.03
HMGCS1Q01581 AC126755.4-201ENST00000549796 1459 ntBASIC14.83□□□□□ -0.03
HMGCS1Q01581 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
HMGCS1Q01581 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
HMGCS1Q01581 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGCS1Q01581 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.83□□□□□ -0.04
HMGCS1Q01581 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
HMGCS1Q01581 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGCS1Q01581 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.83□□□□□ -0.04
HMGCS1Q01581 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
HMGCS1Q01581 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGCS1Q01581 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGCS1Q01581 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.83□□□□□ -0.04
HMGCS1Q01581 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.83□□□□□ -0.04
HMGCS1Q01581 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.83□□□□□ -0.04
HMGCS1Q01581 FAM8A3P-201ENST00000427218 844 ntBASIC14.83□□□□□ -0.04
HMGCS1Q01581 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.83□□□□□ -0.04
HMGCS1Q01581 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
HMGCS1Q01581 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.83□□□□□ -0.04
HMGCS1Q01581 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.83□□□□□ -0.04
HMGCS1Q01581 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.83□□□□□ -0.04
HMGCS1Q01581 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.83□□□□□ -0.04
HMGCS1Q01581 AC067863.1-201ENST00000494933 530 ntBASIC14.83□□□□□ -0.04
HMGCS1Q01581 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.83□□□□□ -0.04
HMGCS1Q01581 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGCS1Q01581 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.83□□□□□ -0.04
HMGCS1Q01581 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.83□□□□□ -0.04
HMGCS1Q01581 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGCS1Q01581 AC015656.1-201ENST00000624209 3578 ntBASIC14.83□□□□□ -0.04
HMGCS1Q01581 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGCS1Q01581 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
HMGCS1Q01581 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGCS1Q01581 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
HMGCS1Q01581 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGCS1Q01581 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGCS1Q01581 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
HMGCS1Q01581 AC100757.3-201ENST00000622361 1406 ntBASIC14.83□□□□□ -0.04
HMGCS1Q01581 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGCS1Q01581 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGCS1Q01581 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGCS1Q01581 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.82□□□□□ -0.04
HMGCS1Q01581 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCS1Q01581 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
HMGCS1Q01581 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCS1Q01581 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGCS1Q01581 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms