Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PRAMEP78395 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEP78395 BTBD7P1-201ENST00000447253 1453 ntBASIC15.57■□□□□ 0.08
PRAMEP78395 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.57■□□□□ 0.08
PRAMEP78395 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
PRAMEP78395 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEP78395 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.57■□□□□ 0.08
PRAMEP78395 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEP78395 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEP78395 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PRAMEP78395 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEP78395 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
PRAMEP78395 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.57■□□□□ 0.08
PRAMEP78395 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PRAMEP78395 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEP78395 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PRAMEP78395 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PRAMEP78395 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEP78395 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEP78395 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.56■□□□□ 0.08
PRAMEP78395 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEP78395 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.56■□□□□ 0.08
PRAMEP78395 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEP78395 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEP78395 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEP78395 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEP78395 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEP78395 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEP78395 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.56■□□□□ 0.08
PRAMEP78395 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PRAMEP78395 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.56■□□□□ 0.08
PRAMEP78395 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.56■□□□□ 0.08
PRAMEP78395 AC114501.2-201ENST00000439631 535 ntBASIC15.56■□□□□ 0.08
PRAMEP78395 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEP78395 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.56■□□□□ 0.08
PRAMEP78395 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
PRAMEP78395 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PRAMEP78395 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.56■□□□□ 0.08
PRAMEP78395 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.56■□□□□ 0.08
PRAMEP78395 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEP78395 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEP78395 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.56■□□□□ 0.08
PRAMEP78395 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PRAMEP78395 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEP78395 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PRAMEP78395 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEP78395 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEP78395 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
PRAMEP78395 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEP78395 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEP78395 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEP78395 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEP78395 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
PRAMEP78395 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEP78395 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.55■□□□□ 0.08
PRAMEP78395 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEP78395 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEP78395 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEP78395 AGAP7P-201ENST00000582299 2062 ntBASIC15.55■□□□□ 0.08
PRAMEP78395 AGAP14-201ENST00000624701 2060 ntBASIC15.55■□□□□ 0.08
PRAMEP78395 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
PRAMEP78395 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEP78395 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.55■□□□□ 0.08
PRAMEP78395 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEP78395 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
PRAMEP78395 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEP78395 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEP78395 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
PRAMEP78395 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEP78395 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.55■□□□□ 0.08
PRAMEP78395 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEP78395 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEP78395 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.55■□□□□ 0.08
PRAMEP78395 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.55■□□□□ 0.08
PRAMEP78395 AC009477.1-201ENST00000452936 217 ntBASIC15.55■□□□□ 0.08
PRAMEP78395 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.55■□□□□ 0.08
PRAMEP78395 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEP78395 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.55■□□□□ 0.08
PRAMEP78395 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEP78395 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEP78395 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.55■□□□□ 0.08
PRAMEP78395 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEP78395 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.55■□□□□ 0.08
PRAMEP78395 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEP78395 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
PRAMEP78395 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEP78395 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEP78395 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEP78395 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PRAMEP78395 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEP78395 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.54■□□□□ 0.08
PRAMEP78395 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEP78395 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEP78395 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.54■□□□□ 0.08
PRAMEP78395 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.54■□□□□ 0.08
PRAMEP78395 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEP78395 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
PRAMEP78395 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEP78395 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEP78395 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms