Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AP005018.1-201ENST00000525475 301 ntBASIC13.37□□□□□ -0.27
UBA52P62987 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.37□□□□□ -0.27
UBA52P62987 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.37□□□□□ -0.27
UBA52P62987 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.37□□□□□ -0.27
UBA52P62987 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.37□□□□□ -0.27
UBA52P62987 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
UBA52P62987 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UBA52P62987 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBA52P62987 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBA52P62987 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.37□□□□□ -0.27
UBA52P62987 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.37□□□□□ -0.27
UBA52P62987 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
UBA52P62987 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.37□□□□□ -0.27
UBA52P62987 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBA52P62987 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBA52P62987 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBA52P62987 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.37□□□□□ -0.27
UBA52P62987 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
UBA52P62987 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.37□□□□□ -0.27
UBA52P62987 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBA52P62987 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UBA52P62987 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBA52P62987 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.37□□□□□ -0.27
UBA52P62987 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.37□□□□□ -0.27
UBA52P62987 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.37□□□□□ -0.27
UBA52P62987 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBA52P62987 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UBA52P62987 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UBA52P62987 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.37□□□□□ -0.27
UBA52P62987 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.37□□□□□ -0.27
UBA52P62987 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.37□□□□□ -0.27
UBA52P62987 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBA52P62987 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBA52P62987 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBA52P62987 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.36□□□□□ -0.27
UBA52P62987 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UBA52P62987 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UBA52P62987 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
UBA52P62987 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBA52P62987 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBA52P62987 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
UBA52P62987 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBA52P62987 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBA52P62987 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBA52P62987 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.36□□□□□ -0.27
UBA52P62987 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBA52P62987 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UBA52P62987 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
UBA52P62987 TOP3BP1-201ENST00000420768 1380 ntBASIC13.36□□□□□ -0.27
UBA52P62987 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.36□□□□□ -0.27
UBA52P62987 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBA52P62987 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBA52P62987 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UBA52P62987 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBA52P62987 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBA52P62987 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
UBA52P62987 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.36□□□□□ -0.27
UBA52P62987 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBA52P62987 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBA52P62987 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBA52P62987 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
UBA52P62987 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBA52P62987 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBA52P62987 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
UBA52P62987 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.36□□□□□ -0.27
UBA52P62987 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.36□□□□□ -0.27
UBA52P62987 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.36□□□□□ -0.27
UBA52P62987 SERBP1P5-201ENST00000510079 1181 ntBASIC13.36□□□□□ -0.27
UBA52P62987 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.36□□□□□ -0.27
UBA52P62987 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.36□□□□□ -0.27
UBA52P62987 AC009118.2-201ENST00000613275 655 ntBASIC13.36□□□□□ -0.27
UBA52P62987 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UBA52P62987 AC073592.8-201ENST00000624126 511 ntBASIC13.36□□□□□ -0.27
UBA52P62987 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
UBA52P62987 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
UBA52P62987 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBA52P62987 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
UBA52P62987 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.36□□□□□ -0.27
UBA52P62987 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UBA52P62987 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBA52P62987 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBA52P62987 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
UBA52P62987 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.36□□□□□ -0.27
UBA52P62987 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UBA52P62987 AC112693.3-201ENST00000624819 1983 ntBASIC13.36□□□□□ -0.27
UBA52P62987 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBA52P62987 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBA52P62987 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
UBA52P62987 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBA52P62987 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.36□□□□□ -0.27
UBA52P62987 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBA52P62987 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
UBA52P62987 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.35□□□□□ -0.27
UBA52P62987 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBA52P62987 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
UBA52P62987 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.35□□□□□ -0.27
UBA52P62987 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UBA52P62987 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBA52P62987 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBA52P62987 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms