Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RIPK4P57078 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RIPK4P57078 B9D1-203ENST00000395615 805 ntTSL 3 BASIC20.03■□□□□ 0.8
RIPK4P57078 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RIPK4P57078 USB1-202ENST00000423271 1217 ntTSL 2 BASIC20.03■□□□□ 0.8
RIPK4P57078 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK4P57078 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK4P57078 AC119751.2-201ENST00000504529 210 ntBASIC20.03■□□□□ 0.8
RIPK4P57078 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC20.03■□□□□ 0.8
RIPK4P57078 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK4P57078 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
RIPK4P57078 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RIPK4P57078 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK4P57078 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RIPK4P57078 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK4P57078 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK4P57078 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK4P57078 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK4P57078 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RIPK4P57078 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK4P57078 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK4P57078 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC20.03■□□□□ 0.8
RIPK4P57078 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK4P57078 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK4P57078 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
RIPK4P57078 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK4P57078 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RIPK4P57078 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK4P57078 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RIPK4P57078 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC20.03■□□□□ 0.8
RIPK4P57078 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RIPK4P57078 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC20.03■□□□□ 0.8
RIPK4P57078 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK4P57078 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC20.02■□□□□ 0.8
RIPK4P57078 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RIPK4P57078 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
RIPK4P57078 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
RIPK4P57078 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC20.02■□□□□ 0.8
RIPK4P57078 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RIPK4P57078 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RIPK4P57078 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RIPK4P57078 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
RIPK4P57078 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
RIPK4P57078 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RIPK4P57078 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC20.02■□□□□ 0.8
RIPK4P57078 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RIPK4P57078 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC20.02■□□□□ 0.8
RIPK4P57078 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC20.02■□□□□ 0.8
RIPK4P57078 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC20.02■□□□□ 0.8
RIPK4P57078 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC20.02■□□□□ 0.8
RIPK4P57078 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC20.02■□□□□ 0.8
RIPK4P57078 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC20.02■□□□□ 0.8
RIPK4P57078 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RIPK4P57078 SERF2-217ENST00000630046 862 ntTSL 5 BASIC20.02■□□□□ 0.8
RIPK4P57078 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
RIPK4P57078 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC20.02■□□□□ 0.8
RIPK4P57078 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RIPK4P57078 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC20.02■□□□□ 0.8
RIPK4P57078 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RIPK4P57078 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RIPK4P57078 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RIPK4P57078 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC20.02■□□□□ 0.79
RIPK4P57078 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
RIPK4P57078 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
RIPK4P57078 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RIPK4P57078 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RIPK4P57078 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RIPK4P57078 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RIPK4P57078 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK4P57078 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK4P57078 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC20.01■□□□□ 0.79
RIPK4P57078 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK4P57078 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC20.01■□□□□ 0.79
RIPK4P57078 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK4P57078 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK4P57078 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK4P57078 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC20.01■□□□□ 0.79
RIPK4P57078 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK4P57078 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC20.01■□□□□ 0.79
RIPK4P57078 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC20.01■□□□□ 0.79
RIPK4P57078 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RIPK4P57078 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK4P57078 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK4P57078 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK4P57078 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK4P57078 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
RIPK4P57078 BOLA2P3-201ENST00000404566 256 ntBASIC20.01■□□□□ 0.79
RIPK4P57078 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RIPK4P57078 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC20.01■□□□□ 0.79
RIPK4P57078 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
RIPK4P57078 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC20.01■□□□□ 0.79
RIPK4P57078 CTBP2P5-201ENST00000454986 1264 ntBASIC20.01■□□□□ 0.79
RIPK4P57078 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RIPK4P57078 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC20.01■□□□□ 0.79
RIPK4P57078 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC20.01■□□□□ 0.79
RIPK4P57078 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC20.01■□□□□ 0.79
RIPK4P57078 RPS24-214ENST00000613865 538 ntTSL 5 BASIC20.01■□□□□ 0.79
RIPK4P57078 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RIPK4P57078 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC20.01■□□□□ 0.79
RIPK4P57078 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms