Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXG1P55316 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXG1P55316 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXG1P55316 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
FOXG1P55316 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXG1P55316 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
FOXG1P55316 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXG1P55316 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXG1P55316 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.43□□□□□ -0.26
FOXG1P55316 KRT8P35-201ENST00000483942 1338 ntBASIC13.43□□□□□ -0.26
FOXG1P55316 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
FOXG1P55316 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
FOXG1P55316 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXG1P55316 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXG1P55316 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXG1P55316 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXG1P55316 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXG1P55316 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXG1P55316 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXG1P55316 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.43□□□□□ -0.26
FOXG1P55316 OR8S1-201ENST00000310194 1080 ntBASIC13.43□□□□□ -0.26
FOXG1P55316 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXG1P55316 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
FOXG1P55316 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.43□□□□□ -0.26
FOXG1P55316 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
FOXG1P55316 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXG1P55316 AL139094.1-201ENST00000405549 1188 ntBASIC13.43□□□□□ -0.26
FOXG1P55316 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.43□□□□□ -0.26
FOXG1P55316 ARSEP1-201ENST00000420443 635 ntBASIC13.43□□□□□ -0.26
FOXG1P55316 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.43□□□□□ -0.26
FOXG1P55316 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXG1P55316 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.43□□□□□ -0.26
FOXG1P55316 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXG1P55316 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.43□□□□□ -0.26
FOXG1P55316 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXG1P55316 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.43□□□□□ -0.26
FOXG1P55316 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.43□□□□□ -0.26
FOXG1P55316 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.43□□□□□ -0.26
FOXG1P55316 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
FOXG1P55316 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
FOXG1P55316 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.43□□□□□ -0.26
FOXG1P55316 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.43□□□□□ -0.26
FOXG1P55316 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
FOXG1P55316 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXG1P55316 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
FOXG1P55316 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXG1P55316 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.43□□□□□ -0.26
FOXG1P55316 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.43□□□□□ -0.26
FOXG1P55316 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
FOXG1P55316 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FOXG1P55316 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.42□□□□□ -0.26
FOXG1P55316 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FOXG1P55316 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FOXG1P55316 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FOXG1P55316 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
FOXG1P55316 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
FOXG1P55316 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FOXG1P55316 AL360270.3-201ENST00000609118 1348 ntBASIC13.42□□□□□ -0.26
FOXG1P55316 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
FOXG1P55316 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
FOXG1P55316 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
FOXG1P55316 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FOXG1P55316 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
FOXG1P55316 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FOXG1P55316 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
FOXG1P55316 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FOXG1P55316 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
FOXG1P55316 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
FOXG1P55316 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
FOXG1P55316 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
FOXG1P55316 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
FOXG1P55316 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.42□□□□□ -0.26
FOXG1P55316 AC005229.1-201ENST00000392885 409 ntBASIC13.42□□□□□ -0.26
FOXG1P55316 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.42□□□□□ -0.26
FOXG1P55316 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.42□□□□□ -0.26
FOXG1P55316 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
FOXG1P55316 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
FOXG1P55316 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.42□□□□□ -0.26
FOXG1P55316 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.42□□□□□ -0.26
FOXG1P55316 AL355864.2-201ENST00000447420 863 ntBASIC13.42□□□□□ -0.26
FOXG1P55316 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
FOXG1P55316 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.42□□□□□ -0.26
FOXG1P55316 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.42□□□□□ -0.26
FOXG1P55316 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.42□□□□□ -0.26
FOXG1P55316 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
FOXG1P55316 AC106886.1-201ENST00000568660 600 ntBASIC13.42□□□□□ -0.26
FOXG1P55316 MIR4259-201ENST00000584466 101 ntBASIC13.42□□□□□ -0.26
FOXG1P55316 AL022328.1-201ENST00000610050 478 ntBASIC13.42□□□□□ -0.26
FOXG1P55316 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
FOXG1P55316 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.42□□□□□ -0.26
FOXG1P55316 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
FOXG1P55316 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FOXG1P55316 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
FOXG1P55316 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
FOXG1P55316 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.42□□□□□ -0.26
FOXG1P55316 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.42□□□□□ -0.26
FOXG1P55316 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
FOXG1P55316 PDIA3P1-201ENST00000471856 1510 ntBASIC13.42□□□□□ -0.26
FOXG1P55316 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FOXG1P55316 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms