Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 ACE3P-201ENST00000423435 1973 ntBASIC16.75■□□□□ 0.27
NCKAP1LP55160 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NCKAP1LP55160 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.75■□□□□ 0.27
NCKAP1LP55160 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NCKAP1LP55160 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKAP1LP55160 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NCKAP1LP55160 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
NCKAP1LP55160 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
NCKAP1LP55160 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.75■□□□□ 0.27
NCKAP1LP55160 AC092933.1-201ENST00000393644 945 ntBASIC16.75■□□□□ 0.27
NCKAP1LP55160 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKAP1LP55160 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.75■□□□□ 0.27
NCKAP1LP55160 U91328.1-201ENST00000437528 223 ntBASIC16.75■□□□□ 0.27
NCKAP1LP55160 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKAP1LP55160 AL355864.2-201ENST00000447420 863 ntBASIC16.75■□□□□ 0.27
NCKAP1LP55160 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.75■□□□□ 0.27
NCKAP1LP55160 AC022616.1-201ENST00000518688 554 ntBASIC16.75■□□□□ 0.27
NCKAP1LP55160 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.75■□□□□ 0.27
NCKAP1LP55160 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.75■□□□□ 0.27
NCKAP1LP55160 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKAP1LP55160 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.75■□□□□ 0.27
NCKAP1LP55160 AL603764.1-201ENST00000636452 321 ntBASIC16.75■□□□□ 0.27
NCKAP1LP55160 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKAP1LP55160 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
NCKAP1LP55160 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NCKAP1LP55160 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
NCKAP1LP55160 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.75■□□□□ 0.27
NCKAP1LP55160 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKAP1LP55160 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.75■□□□□ 0.27
NCKAP1LP55160 AC018665.1-201ENST00000622927 1362 ntBASIC16.75■□□□□ 0.27
NCKAP1LP55160 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKAP1LP55160 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKAP1LP55160 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKAP1LP55160 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.75■□□□□ 0.27
NCKAP1LP55160 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NCKAP1LP55160 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKAP1LP55160 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCKAP1LP55160 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKAP1LP55160 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.74■□□□□ 0.27
NCKAP1LP55160 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
NCKAP1LP55160 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKAP1LP55160 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.74■□□□□ 0.27
NCKAP1LP55160 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NCKAP1LP55160 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.74■□□□□ 0.27
NCKAP1LP55160 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.74■□□□□ 0.27
NCKAP1LP55160 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
NCKAP1LP55160 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.74■□□□□ 0.27
NCKAP1LP55160 AL137783.1-201ENST00000623494 1896 ntBASIC16.74■□□□□ 0.27
NCKAP1LP55160 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.74■□□□□ 0.27
NCKAP1LP55160 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKAP1LP55160 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKAP1LP55160 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.74■□□□□ 0.27
NCKAP1LP55160 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
NCKAP1LP55160 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
NCKAP1LP55160 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKAP1LP55160 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NCKAP1LP55160 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.74■□□□□ 0.27
NCKAP1LP55160 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
NCKAP1LP55160 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.74■□□□□ 0.27
NCKAP1LP55160 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.74■□□□□ 0.27
NCKAP1LP55160 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.74■□□□□ 0.27
NCKAP1LP55160 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NCKAP1LP55160 AC106886.1-201ENST00000568660 600 ntBASIC16.74■□□□□ 0.27
NCKAP1LP55160 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.74■□□□□ 0.27
NCKAP1LP55160 AC145423.3-201ENST00000615987 467 ntBASIC16.74■□□□□ 0.27
NCKAP1LP55160 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.74■□□□□ 0.27
NCKAP1LP55160 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.74■□□□□ 0.27
NCKAP1LP55160 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKAP1LP55160 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKAP1LP55160 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NCKAP1LP55160 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.74■□□□□ 0.27
NCKAP1LP55160 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKAP1LP55160 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKAP1LP55160 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKAP1LP55160 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKAP1LP55160 AL138709.1-201ENST00000614840 1693 ntBASIC16.74■□□□□ 0.27
NCKAP1LP55160 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NCKAP1LP55160 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.74■□□□□ 0.27
NCKAP1LP55160 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKAP1LP55160 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKAP1LP55160 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKAP1LP55160 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKAP1LP55160 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NCKAP1LP55160 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.74■□□□□ 0.27
NCKAP1LP55160 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NCKAP1LP55160 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKAP1LP55160 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKAP1LP55160 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKAP1LP55160 LINC00528-201ENST00000600723 2160 ntBASIC16.74■□□□□ 0.27
NCKAP1LP55160 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKAP1LP55160 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.74■□□□□ 0.27
NCKAP1LP55160 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKAP1LP55160 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.74■□□□□ 0.27
NCKAP1LP55160 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCKAP1LP55160 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKAP1LP55160 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
NCKAP1LP55160 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.73■□□□□ 0.27
NCKAP1LP55160 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKAP1LP55160 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.73■□□□□ 0.27
NCKAP1LP55160 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms