Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.87■□□□□ 0.29
LBX1P52954 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LBX1P52954 KNOP1P1-201ENST00000542108 989 ntBASIC16.87■□□□□ 0.29
LBX1P52954 AC120498.5-201ENST00000561757 299 ntBASIC16.87■□□□□ 0.29
LBX1P52954 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC16.87■□□□□ 0.29
LBX1P52954 TRMT112P3-201ENST00000580149 358 ntBASIC16.87■□□□□ 0.29
LBX1P52954 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.87■□□□□ 0.29
LBX1P52954 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LBX1P52954 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.87■□□□□ 0.29
LBX1P52954 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LBX1P52954 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LBX1P52954 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC16.87■□□□□ 0.29
LBX1P52954 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LBX1P52954 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LBX1P52954 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LBX1P52954 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LBX1P52954 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LBX1P52954 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LBX1P52954 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LBX1P52954 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LBX1P52954 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.86■□□□□ 0.29
LBX1P52954 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LBX1P52954 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LBX1P52954 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LBX1P52954 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LBX1P52954 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LBX1P52954 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LBX1P52954 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LBX1P52954 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LBX1P52954 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LBX1P52954 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
LBX1P52954 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LBX1P52954 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC16.86■□□□□ 0.29
LBX1P52954 RGS5-216ENST00000449680 788 ntTSL 3 BASIC16.86■□□□□ 0.29
LBX1P52954 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LBX1P52954 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC16.86■□□□□ 0.29
LBX1P52954 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.86■□□□□ 0.29
LBX1P52954 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC16.86■□□□□ 0.29
LBX1P52954 MIR4254-201ENST00000581063 76 ntBASIC16.86■□□□□ 0.29
LBX1P52954 MIR6893-201ENST00000613458 69 ntBASIC16.86■□□□□ 0.29
LBX1P52954 AC027601.3-201ENST00000622907 509 ntBASIC16.86■□□□□ 0.29
LBX1P52954 AC020904.3-201ENST00000624199 442 ntBASIC16.86■□□□□ 0.29
LBX1P52954 ST5-261ENST00000626808 1071 ntTSL 5 BASIC16.86■□□□□ 0.29
LBX1P52954 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LBX1P52954 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LBX1P52954 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
LBX1P52954 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
LBX1P52954 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
LBX1P52954 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.86■□□□□ 0.29
LBX1P52954 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LBX1P52954 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LBX1P52954 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC16.86■□□□□ 0.29
LBX1P52954 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LBX1P52954 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LBX1P52954 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
LBX1P52954 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.86■□□□□ 0.29
LBX1P52954 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.86■□□□□ 0.29
LBX1P52954 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
LBX1P52954 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LBX1P52954 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LBX1P52954 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
LBX1P52954 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LBX1P52954 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LBX1P52954 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LBX1P52954 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LBX1P52954 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LBX1P52954 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
LBX1P52954 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LBX1P52954 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LBX1P52954 RN7SKP230-201ENST00000365642 335 ntBASIC16.85■□□□□ 0.29
LBX1P52954 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC16.85■□□□□ 0.29
LBX1P52954 SOD2-205ENST00000444946 917 ntTSL 2 BASIC16.85■□□□□ 0.29
LBX1P52954 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC16.85■□□□□ 0.29
LBX1P52954 CICP12-201ENST00000455801 843 ntBASIC16.85■□□□□ 0.29
LBX1P52954 AC008026.2-201ENST00000495438 348 ntBASIC16.85■□□□□ 0.29
LBX1P52954 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
LBX1P52954 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC16.85■□□□□ 0.29
LBX1P52954 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC16.85■□□□□ 0.29
LBX1P52954 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC16.85■□□□□ 0.29
LBX1P52954 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC16.85■□□□□ 0.29
LBX1P52954 AP000769.1-203ENST00000637245 208 ntBASIC16.85■□□□□ 0.29
LBX1P52954 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LBX1P52954 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.85■□□□□ 0.29
LBX1P52954 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
LBX1P52954 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LBX1P52954 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
LBX1P52954 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LBX1P52954 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.85■□□□□ 0.29
LBX1P52954 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC16.85■□□□□ 0.29
LBX1P52954 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LBX1P52954 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
LBX1P52954 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LBX1P52954 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
LBX1P52954 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
LBX1P52954 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.85■□□□□ 0.29
LBX1P52954 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LBX1P52954 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC16.85■□□□□ 0.29
LBX1P52954 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.84■□□□□ 0.29
LBX1P52954 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LBX1P52954 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms