Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLCN2P51788 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLCN2P51788 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLCN2P51788 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLCN2P51788 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLCN2P51788 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.96□□□□□ -0.01
CLCN2P51788 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLCN2P51788 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.96□□□□□ -0.01
CLCN2P51788 SPDYE17-201ENST00000412399 783 ntBASIC14.96□□□□□ -0.01
CLCN2P51788 AL080243.2-201ENST00000418783 582 ntBASIC14.96□□□□□ -0.01
CLCN2P51788 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLCN2P51788 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.96□□□□□ -0.01
CLCN2P51788 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLCN2P51788 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLCN2P51788 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.96□□□□□ -0.01
CLCN2P51788 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.96□□□□□ -0.01
CLCN2P51788 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.96□□□□□ -0.01
CLCN2P51788 AC243562.2-201ENST00000561247 970 ntBASIC14.96□□□□□ -0.01
CLCN2P51788 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLCN2P51788 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.96□□□□□ -0.01
CLCN2P51788 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.96□□□□□ -0.01
CLCN2P51788 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.96□□□□□ -0.01
CLCN2P51788 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
CLCN2P51788 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLCN2P51788 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLCN2P51788 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLCN2P51788 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.96□□□□□ -0.01
CLCN2P51788 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.96□□□□□ -0.01
CLCN2P51788 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.96□□□□□ -0.02
CLCN2P51788 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CLCN2P51788 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
CLCN2P51788 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
CLCN2P51788 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CLCN2P51788 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.95□□□□□ -0.02
CLCN2P51788 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLCN2P51788 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CLCN2P51788 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLCN2P51788 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLCN2P51788 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLCN2P51788 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLCN2P51788 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.95□□□□□ -0.02
CLCN2P51788 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLCN2P51788 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.95□□□□□ -0.02
CLCN2P51788 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CLCN2P51788 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLCN2P51788 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLCN2P51788 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLCN2P51788 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLCN2P51788 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLCN2P51788 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLCN2P51788 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLCN2P51788 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.95□□□□□ -0.02
CLCN2P51788 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLCN2P51788 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.95□□□□□ -0.02
CLCN2P51788 TSSK5P-201ENST00000423978 907 ntBASIC14.95□□□□□ -0.02
CLCN2P51788 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.95□□□□□ -0.02
CLCN2P51788 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.95□□□□□ -0.02
CLCN2P51788 AC004890.2-204ENST00000481968 304 ntBASIC14.95□□□□□ -0.02
CLCN2P51788 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.95□□□□□ -0.02
CLCN2P51788 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.95□□□□□ -0.02
CLCN2P51788 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.95□□□□□ -0.02
CLCN2P51788 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.95□□□□□ -0.02
CLCN2P51788 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLCN2P51788 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLCN2P51788 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLCN2P51788 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.95□□□□□ -0.02
CLCN2P51788 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLCN2P51788 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.95□□□□□ -0.02
CLCN2P51788 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLCN2P51788 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.95□□□□□ -0.02
CLCN2P51788 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLCN2P51788 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLCN2P51788 AC118758.2-201ENST00000614242 2813 ntBASIC14.95□□□□□ -0.02
CLCN2P51788 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.95□□□□□ -0.02
CLCN2P51788 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLCN2P51788 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CLCN2P51788 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CLCN2P51788 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLCN2P51788 PTENP1-202ENST00000532280 3996 ntBASIC14.95□□□□□ -0.02
CLCN2P51788 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.95□□□□□ -0.02
CLCN2P51788 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLCN2P51788 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLCN2P51788 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.95□□□□□ -0.02
CLCN2P51788 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.95□□□□□ -0.02
CLCN2P51788 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.95□□□□□ -0.02
CLCN2P51788 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CLCN2P51788 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.95□□□□□ -0.02
CLCN2P51788 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLCN2P51788 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CLCN2P51788 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CLCN2P51788 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLCN2P51788 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.94□□□□□ -0.02
CLCN2P51788 CYP4F24P-201ENST00000586049 1580 ntBASIC14.94□□□□□ -0.02
CLCN2P51788 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLCN2P51788 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CLCN2P51788 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.94□□□□□ -0.02
CLCN2P51788 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CLCN2P51788 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLCN2P51788 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.94□□□□□ -0.02
CLCN2P51788 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms