Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.69□□□□□ -0.22
CD40LGP29965 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40LGP29965 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD40LGP29965 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CD40LGP29965 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40LGP29965 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.69□□□□□ -0.22
CD40LGP29965 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
CD40LGP29965 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40LGP29965 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40LGP29965 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40LGP29965 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40LGP29965 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD40LGP29965 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD40LGP29965 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40LGP29965 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD40LGP29965 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD40LGP29965 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CD40LGP29965 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.68□□□□□ -0.22
CD40LGP29965 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
CD40LGP29965 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD40LGP29965 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD40LGP29965 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD40LGP29965 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD40LGP29965 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD40LGP29965 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CD40LGP29965 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD40LGP29965 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
CD40LGP29965 BNIP3P1-202ENST00000550043 1585 ntBASIC13.68□□□□□ -0.22
CD40LGP29965 AC020658.7-201ENST00000624274 2442 ntBASIC13.68□□□□□ -0.22
CD40LGP29965 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.68□□□□□ -0.22
CD40LGP29965 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD40LGP29965 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD40LGP29965 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD40LGP29965 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.68□□□□□ -0.22
CD40LGP29965 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD40LGP29965 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.68□□□□□ -0.22
CD40LGP29965 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.68□□□□□ -0.22
CD40LGP29965 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD40LGP29965 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.68□□□□□ -0.22
CD40LGP29965 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD40LGP29965 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD40LGP29965 TPM4P1-201ENST00000436100 807 ntBASIC13.68□□□□□ -0.22
CD40LGP29965 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD40LGP29965 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CD40LGP29965 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.68□□□□□ -0.22
CD40LGP29965 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.68□□□□□ -0.22
CD40LGP29965 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD40LGP29965 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.68□□□□□ -0.22
CD40LGP29965 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD40LGP29965 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.68□□□□□ -0.22
CD40LGP29965 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.68□□□□□ -0.22
CD40LGP29965 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC13.68□□□□□ -0.22
CD40LGP29965 MTDHP3-201ENST00000594186 672 ntBASIC13.68□□□□□ -0.22
CD40LGP29965 AC064862.7-201ENST00000604520 867 ntBASIC13.68□□□□□ -0.22
CD40LGP29965 AL732292.2-201ENST00000609649 430 ntBASIC13.68□□□□□ -0.22
CD40LGP29965 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC13.68□□□□□ -0.22
CD40LGP29965 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CD40LGP29965 AL139288.1-201ENST00000623748 933 ntBASIC13.68□□□□□ -0.22
CD40LGP29965 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD40LGP29965 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.68□□□□□ -0.22
CD40LGP29965 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD40LGP29965 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CD40LGP29965 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.68□□□□□ -0.22
CD40LGP29965 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.68□□□□□ -0.22
CD40LGP29965 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD40LGP29965 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.68□□□□□ -0.22
CD40LGP29965 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CD40LGP29965 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD40LGP29965 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.68□□□□□ -0.22
CD40LGP29965 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CD40LGP29965 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD40LGP29965 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.68□□□□□ -0.22
CD40LGP29965 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD40LGP29965 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.67□□□□□ -0.22
CD40LGP29965 AC073548.1-201ENST00000624088 1882 ntBASIC13.67□□□□□ -0.22
CD40LGP29965 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD40LGP29965 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
CD40LGP29965 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD40LGP29965 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD40LGP29965 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD40LGP29965 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
CD40LGP29965 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD40LGP29965 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.67□□□□□ -0.22
CD40LGP29965 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD40LGP29965 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD40LGP29965 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD40LGP29965 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD40LGP29965 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD40LGP29965 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD40LGP29965 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.67□□□□□ -0.22
CD40LGP29965 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD40LGP29965 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
CD40LGP29965 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD40LGP29965 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD40LGP29965 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD40LGP29965 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD40LGP29965 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD40LGP29965 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CD40LGP29965 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD40LGP29965 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms