Protein–RNA interactions for Protein: P28329

CHAT, Choline O-acetyltransferase, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHATP28329 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHATP28329 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CHATP28329 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHATP28329 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.17□□□□□ -0.3
CHATP28329 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.17□□□□□ -0.3
CHATP28329 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHATP28329 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.17□□□□□ -0.3
CHATP28329 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHATP28329 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHATP28329 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.17□□□□□ -0.3
CHATP28329 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHATP28329 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CHATP28329 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHATP28329 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHATP28329 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CHATP28329 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.17□□□□□ -0.3
CHATP28329 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHATP28329 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHATP28329 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHATP28329 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CHATP28329 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHATP28329 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.17□□□□□ -0.3
CHATP28329 AL137784.3-201ENST00000623858 2288 ntBASIC13.17□□□□□ -0.3
CHATP28329 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHATP28329 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CHATP28329 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHATP28329 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHATP28329 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.17□□□□□ -0.3
CHATP28329 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.17□□□□□ -0.3
CHATP28329 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.17□□□□□ -0.3
CHATP28329 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.17□□□□□ -0.3
CHATP28329 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.17□□□□□ -0.3
CHATP28329 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.17□□□□□ -0.3
CHATP28329 ALG1L5P-201ENST00000482043 771 ntBASIC13.17□□□□□ -0.3
CHATP28329 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.17□□□□□ -0.3
CHATP28329 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.17□□□□□ -0.3
CHATP28329 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.17□□□□□ -0.3
CHATP28329 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.17□□□□□ -0.3
CHATP28329 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.17□□□□□ -0.3
CHATP28329 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.17□□□□□ -0.3
CHATP28329 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.17□□□□□ -0.3
CHATP28329 AC022145.2-201ENST00000598203 171 ntBASIC13.17□□□□□ -0.3
CHATP28329 AC018529.1-201ENST00000613063 361 ntBASIC13.17□□□□□ -0.3
CHATP28329 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CHATP28329 AC007191.1-201ENST00000623179 2995 ntBASIC13.17□□□□□ -0.3
CHATP28329 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CHATP28329 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.17□□□□□ -0.3
CHATP28329 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.17□□□□□ -0.3
CHATP28329 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHATP28329 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHATP28329 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHATP28329 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHATP28329 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHATP28329 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHATP28329 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CHATP28329 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHATP28329 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.17□□□□□ -0.3
CHATP28329 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHATP28329 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHATP28329 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHATP28329 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.17□□□□□ -0.3
CHATP28329 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHATP28329 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHATP28329 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHATP28329 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHATP28329 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.17□□□□□ -0.3
CHATP28329 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.16□□□□□ -0.3
CHATP28329 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHATP28329 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHATP28329 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHATP28329 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHATP28329 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CHATP28329 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHATP28329 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.16□□□□□ -0.3
CHATP28329 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHATP28329 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CHATP28329 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHATP28329 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CHATP28329 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHATP28329 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHATP28329 AC007686.3-201ENST00000619017 3487 ntBASIC13.16□□□□□ -0.3
CHATP28329 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHATP28329 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHATP28329 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHATP28329 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
CHATP28329 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHATP28329 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHATP28329 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.16□□□□□ -0.3
CHATP28329 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CHATP28329 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHATP28329 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CHATP28329 GHSR-202ENST00000427970 912 ntBASIC13.16□□□□□ -0.3
CHATP28329 AC005237.2-201ENST00000434368 219 ntBASIC13.16□□□□□ -0.3
CHATP28329 TARDBPP1-201ENST00000442013 1203 ntBASIC13.16□□□□□ -0.3
CHATP28329 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
CHATP28329 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CHATP28329 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.16□□□□□ -0.3
CHATP28329 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.16□□□□□ -0.3
CHATP28329 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.16□□□□□ -0.3
CHATP28329 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms