Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AL591163.1-201ENST00000641757 987 ntBASIC14.16□□□□□ -0.14
ABCD3P28288 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ABCD3P28288 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.16□□□□□ -0.14
ABCD3P28288 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ABCD3P28288 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ABCD3P28288 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ABCD3P28288 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.16□□□□□ -0.14
ABCD3P28288 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ABCD3P28288 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ABCD3P28288 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.16□□□□□ -0.14
ABCD3P28288 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ABCD3P28288 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ABCD3P28288 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
ABCD3P28288 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.16□□□□□ -0.14
ABCD3P28288 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ABCD3P28288 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ABCD3P28288 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ABCD3P28288 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ABCD3P28288 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
ABCD3P28288 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.15□□□□□ -0.14
ABCD3P28288 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ABCD3P28288 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ABCD3P28288 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ABCD3P28288 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
ABCD3P28288 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.15□□□□□ -0.14
ABCD3P28288 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ABCD3P28288 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.15□□□□□ -0.14
ABCD3P28288 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.15□□□□□ -0.14
ABCD3P28288 AC006486.2-201ENST00000624246 2199 ntBASIC14.15□□□□□ -0.14
ABCD3P28288 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
ABCD3P28288 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.15□□□□□ -0.14
ABCD3P28288 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ABCD3P28288 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ABCD3P28288 AL645937.2-201ENST00000396808 931 ntBASIC14.15□□□□□ -0.14
ABCD3P28288 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.15□□□□□ -0.14
ABCD3P28288 NUS1P3-201ENST00000423502 862 ntBASIC14.15□□□□□ -0.14
ABCD3P28288 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.15□□□□□ -0.14
ABCD3P28288 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.15□□□□□ -0.14
ABCD3P28288 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ABCD3P28288 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.15□□□□□ -0.14
ABCD3P28288 AC009486.1-201ENST00000569860 813 ntBASIC14.15□□□□□ -0.14
ABCD3P28288 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.15□□□□□ -0.14
ABCD3P28288 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.15□□□□□ -0.14
ABCD3P28288 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.15□□□□□ -0.14
ABCD3P28288 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.15□□□□□ -0.14
ABCD3P28288 RPSAP52-203ENST00000622976 1023 ntBASIC14.15□□□□□ -0.14
ABCD3P28288 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
ABCD3P28288 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ABCD3P28288 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ABCD3P28288 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ABCD3P28288 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ABCD3P28288 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ABCD3P28288 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ABCD3P28288 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ABCD3P28288 REXO1L4P-201ENST00000605109 1937 ntBASIC14.15□□□□□ -0.14
ABCD3P28288 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
ABCD3P28288 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ABCD3P28288 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ABCD3P28288 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
ABCD3P28288 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ABCD3P28288 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ABCD3P28288 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ABCD3P28288 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ABCD3P28288 AL158070.2-201ENST00000623713 1621 ntBASIC14.15□□□□□ -0.14
ABCD3P28288 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ABCD3P28288 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ABCD3P28288 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.15□□□□□ -0.14
ABCD3P28288 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
ABCD3P28288 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
ABCD3P28288 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
ABCD3P28288 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
ABCD3P28288 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ABCD3P28288 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ABCD3P28288 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ABCD3P28288 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
ABCD3P28288 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ABCD3P28288 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ABCD3P28288 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ABCD3P28288 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ABCD3P28288 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
ABCD3P28288 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ABCD3P28288 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ABCD3P28288 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ABCD3P28288 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ABCD3P28288 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ABCD3P28288 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ABCD3P28288 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ABCD3P28288 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ABCD3P28288 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.14□□□□□ -0.15
ABCD3P28288 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
ABCD3P28288 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.14□□□□□ -0.15
ABCD3P28288 ACKR1-201ENST00000368121 1240 ntBASIC14.14□□□□□ -0.15
ABCD3P28288 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.14□□□□□ -0.15
ABCD3P28288 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ABCD3P28288 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.14□□□□□ -0.15
ABCD3P28288 AC005034.1-201ENST00000426657 489 ntBASIC14.14□□□□□ -0.15
ABCD3P28288 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.14□□□□□ -0.15
ABCD3P28288 ACTG1P3-201ENST00000431775 1114 ntBASIC14.14□□□□□ -0.15
ABCD3P28288 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ABCD3P28288 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms