Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CD40P25942 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CD40P25942 AC087481.3-201ENST00000602886 1894 ntBASIC13.21□□□□□ -0.29
CD40P25942 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CD40P25942 AC020658.6-201ENST00000623564 1870 ntBASIC13.21□□□□□ -0.29
CD40P25942 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CD40P25942 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.21□□□□□ -0.29
CD40P25942 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.21□□□□□ -0.29
CD40P25942 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
CD40P25942 AC067930.6-201ENST00000623257 4947 ntBASIC13.21□□□□□ -0.29
CD40P25942 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CD40P25942 AC006001.1-201ENST00000325130 474 ntBASIC13.21□□□□□ -0.29
CD40P25942 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.21□□□□□ -0.29
CD40P25942 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CD40P25942 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CD40P25942 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CD40P25942 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.21□□□□□ -0.29
CD40P25942 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.29
CD40P25942 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CD40P25942 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
CD40P25942 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.21□□□□□ -0.29
CD40P25942 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CD40P25942 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.21□□□□□ -0.29
CD40P25942 RNA5SP486-201ENST00000515961 83 ntBASIC13.21□□□□□ -0.29
CD40P25942 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.21□□□□□ -0.29
CD40P25942 AC078819.1-201ENST00000547454 765 ntBASIC13.21□□□□□ -0.29
CD40P25942 AC012085.1-201ENST00000548270 765 ntBASIC13.21□□□□□ -0.29
CD40P25942 AL583810.1-201ENST00000553344 1045 ntBASIC13.21□□□□□ -0.29
CD40P25942 AC023310.1-201ENST00000554836 735 ntBASIC13.21□□□□□ -0.29
CD40P25942 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.21□□□□□ -0.29
CD40P25942 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.21□□□□□ -0.29
CD40P25942 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.21□□□□□ -0.29
CD40P25942 RN7SL48P-201ENST00000579283 293 ntBASIC13.21□□□□□ -0.29
CD40P25942 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.21□□□□□ -0.29
CD40P25942 AC008687.7-202ENST00000637404 953 ntBASIC13.21□□□□□ -0.29
CD40P25942 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.21□□□□□ -0.29
CD40P25942 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CD40P25942 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
CD40P25942 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
CD40P25942 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CD40P25942 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CD40P25942 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
CD40P25942 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CD40P25942 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CD40P25942 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CD40P25942 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.21□□□□□ -0.3
CD40P25942 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
CD40P25942 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CD40P25942 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CD40P25942 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
CD40P25942 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CD40P25942 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CD40P25942 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.21□□□□□ -0.3
CD40P25942 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
CD40P25942 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CD40P25942 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CD40P25942 CICP11-201ENST00000434745 2827 ntBASIC13.21□□□□□ -0.3
CD40P25942 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CD40P25942 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.21□□□□□ -0.3
CD40P25942 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.2□□□□□ -0.3
CD40P25942 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.2□□□□□ -0.3
CD40P25942 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CD40P25942 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CD40P25942 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CD40P25942 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CD40P25942 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD40P25942 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CD40P25942 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD40P25942 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CD40P25942 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.2□□□□□ -0.3
CD40P25942 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD40P25942 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD40P25942 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD40P25942 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD40P25942 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD40P25942 TPM3P8-201ENST00000330554 643 ntBASIC13.2□□□□□ -0.3
CD40P25942 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.2□□□□□ -0.3
CD40P25942 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD40P25942 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD40P25942 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.2□□□□□ -0.3
CD40P25942 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CD40P25942 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CD40P25942 AC022616.1-201ENST00000518688 554 ntBASIC13.2□□□□□ -0.3
CD40P25942 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.2□□□□□ -0.3
CD40P25942 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.2□□□□□ -0.3
CD40P25942 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CD40P25942 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.2□□□□□ -0.3
CD40P25942 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD40P25942 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.2□□□□□ -0.3
CD40P25942 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.2□□□□□ -0.3
CD40P25942 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.2□□□□□ -0.3
CD40P25942 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.2□□□□□ -0.3
CD40P25942 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.2□□□□□ -0.3
CD40P25942 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CD40P25942 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CD40P25942 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.2□□□□□ -0.3
CD40P25942 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.2□□□□□ -0.3
CD40P25942 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.2□□□□□ -0.3
CD40P25942 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD40P25942 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms