Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
RFX1P22670 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.75■□□□□ 0.27
RFX1P22670 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX1P22670 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX1P22670 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX1P22670 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX1P22670 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
RFX1P22670 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
RFX1P22670 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RFX1P22670 AC104989.1-201ENST00000519711 778 ntBASIC16.75■□□□□ 0.27
RFX1P22670 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
RFX1P22670 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RFX1P22670 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.75■□□□□ 0.27
RFX1P22670 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.75■□□□□ 0.27
RFX1P22670 LINC01115-203ENST00000606068 577 ntBASIC16.75■□□□□ 0.27
RFX1P22670 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.75■□□□□ 0.27
RFX1P22670 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
RFX1P22670 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.75■□□□□ 0.27
RFX1P22670 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.75■□□□□ 0.27
RFX1P22670 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RFX1P22670 NORAD-201ENST00000565493 5339 ntBASIC16.75■□□□□ 0.27
RFX1P22670 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX1P22670 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX1P22670 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX1P22670 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RFX1P22670 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RFX1P22670 AL121723.1-201ENST00000445194 1519 ntBASIC16.75■□□□□ 0.27
RFX1P22670 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RFX1P22670 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.75■□□□□ 0.27
RFX1P22670 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RFX1P22670 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RFX1P22670 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX1P22670 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.75■□□□□ 0.27
RFX1P22670 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
RFX1P22670 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
RFX1P22670 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFX1P22670 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RFX1P22670 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RFX1P22670 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFX1P22670 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFX1P22670 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFX1P22670 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RFX1P22670 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
RFX1P22670 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.74■□□□□ 0.27
RFX1P22670 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFX1P22670 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFX1P22670 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
RFX1P22670 AC104457.1-201ENST00000401024 814 ntBASIC16.74■□□□□ 0.27
RFX1P22670 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.74■□□□□ 0.27
RFX1P22670 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.74■□□□□ 0.27
RFX1P22670 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.74■□□□□ 0.27
RFX1P22670 SPDYE18-201ENST00000510091 1050 ntBASIC16.74■□□□□ 0.27
RFX1P22670 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.74■□□□□ 0.27
RFX1P22670 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.74■□□□□ 0.27
RFX1P22670 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFX1P22670 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.74■□□□□ 0.27
RFX1P22670 AC068587.10-201ENST00000641210 219 ntBASIC16.74■□□□□ 0.27
RFX1P22670 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RFX1P22670 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFX1P22670 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFX1P22670 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.74■□□□□ 0.27
RFX1P22670 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFX1P22670 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RFX1P22670 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFX1P22670 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RFX1P22670 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RFX1P22670 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.74■□□□□ 0.27
RFX1P22670 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.74■□□□□ 0.27
RFX1P22670 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RFX1P22670 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.74■□□□□ 0.27
RFX1P22670 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFX1P22670 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.73■□□□□ 0.27
RFX1P22670 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RFX1P22670 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFX1P22670 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.73■□□□□ 0.27
RFX1P22670 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.73■□□□□ 0.27
RFX1P22670 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.73■□□□□ 0.27
RFX1P22670 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RFX1P22670 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.73■□□□□ 0.27
RFX1P22670 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFX1P22670 TMEM14DP-201ENST00000422205 345 ntBASIC16.73■□□□□ 0.27
RFX1P22670 AC104596.2-201ENST00000512793 793 ntBASIC16.73■□□□□ 0.27
RFX1P22670 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.73■□□□□ 0.27
RFX1P22670 SRD5A3P1-201ENST00000603021 949 ntBASIC16.73■□□□□ 0.27
RFX1P22670 AC000095.1-201ENST00000603208 874 ntBASIC16.73■□□□□ 0.27
RFX1P22670 AC093726.1-201ENST00000608064 963 ntBASIC16.73■□□□□ 0.27
RFX1P22670 AL109936.8-201ENST00000641772 604 ntBASIC16.73■□□□□ 0.27
RFX1P22670 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
RFX1P22670 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFX1P22670 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.73■□□□□ 0.27
RFX1P22670 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFX1P22670 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.73■□□□□ 0.27
RFX1P22670 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RFX1P22670 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFX1P22670 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RFX1P22670 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFX1P22670 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RFX1P22670 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.73■□□□□ 0.27
RFX1P22670 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RFX1P22670 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms