Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 AC025183.3-201ENST00000623526 1482 ntBASIC12.18□□□□□ -0.46
NF1P21359 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.17□□□□□ -0.46
NF1P21359 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
NF1P21359 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.17□□□□□ -0.46
NF1P21359 CTBP2P8-201ENST00000422584 1330 ntBASIC12.17□□□□□ -0.46
NF1P21359 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC12.17□□□□□ -0.46
NF1P21359 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
NF1P21359 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NF1P21359 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
NF1P21359 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NF1P21359 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NF1P21359 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NF1P21359 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
NF1P21359 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NF1P21359 OLA1P2-201ENST00000395519 1264 ntBASIC12.17□□□□□ -0.46
NF1P21359 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
NF1P21359 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC12.17□□□□□ -0.46
NF1P21359 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC12.17□□□□□ -0.46
NF1P21359 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NF1P21359 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NF1P21359 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NF1P21359 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC12.17□□□□□ -0.46
NF1P21359 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NF1P21359 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC12.17□□□□□ -0.46
NF1P21359 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NF1P21359 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NF1P21359 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NF1P21359 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
NF1P21359 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC12.17□□□□□ -0.46
NF1P21359 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC12.17□□□□□ -0.46
NF1P21359 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
NF1P21359 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
NF1P21359 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
NF1P21359 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
NF1P21359 PGAM1P12-201ENST00000505622 748 ntBASIC12.17□□□□□ -0.46
NF1P21359 RPS23-204ENST00000507980 836 ntTSL 2 BASIC12.17□□□□□ -0.46
NF1P21359 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NF1P21359 AC106820.3-201ENST00000561653 397 ntBASIC12.17□□□□□ -0.46
NF1P21359 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.17□□□□□ -0.46
NF1P21359 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.17□□□□□ -0.46
NF1P21359 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NF1P21359 ZNF436-AS1-201ENST00000335648 2547 ntBASIC12.17□□□□□ -0.46
NF1P21359 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC12.17□□□□□ -0.46
NF1P21359 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NF1P21359 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
NF1P21359 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC12.17□□□□□ -0.46
NF1P21359 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
NF1P21359 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
NF1P21359 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NF1P21359 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC12.17□□□□□ -0.46
NF1P21359 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NF1P21359 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NF1P21359 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
NF1P21359 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC12.16□□□□□ -0.46
NF1P21359 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
NF1P21359 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
NF1P21359 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
NF1P21359 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NF1P21359 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC12.16□□□□□ -0.46
NF1P21359 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
NF1P21359 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
NF1P21359 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NF1P21359 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NF1P21359 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NF1P21359 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.16□□□□□ -0.46
NF1P21359 FAM86B3P-203ENST00000523992 854 ntBASIC12.16□□□□□ -0.46
NF1P21359 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
NF1P21359 LINC01783-202ENST00000614408 828 ntBASIC12.16□□□□□ -0.46
NF1P21359 BX284668.2-205ENST00000619677 828 ntBASIC12.16□□□□□ -0.46
NF1P21359 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
NF1P21359 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NF1P21359 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NF1P21359 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NF1P21359 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NF1P21359 LTB4R2-202ENST00000528054 3092 ntBASIC12.16□□□□□ -0.46
NF1P21359 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC12.16□□□□□ -0.46
NF1P21359 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NF1P21359 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
NF1P21359 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NF1P21359 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NF1P21359 MAGEA7P-201ENST00000436482 942 ntBASIC12.16□□□□□ -0.46
NF1P21359 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.16□□□□□ -0.46
NF1P21359 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
NF1P21359 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
NF1P21359 AC087392.5-201ENST00000612517 489 ntBASIC12.16□□□□□ -0.46
NF1P21359 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.16□□□□□ -0.46
NF1P21359 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC12.16□□□□□ -0.46
NF1P21359 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC12.16□□□□□ -0.46
NF1P21359 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NF1P21359 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NF1P21359 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
NF1P21359 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NF1P21359 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NF1P21359 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC12.16□□□□□ -0.46
NF1P21359 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
NF1P21359 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NF1P21359 AC009093.2-202ENST00000620513 2079 ntBASIC12.16□□□□□ -0.46
NF1P21359 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
NF1P21359 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NF1P21359 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms