Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC073347.1-201ENST00000421633 2643 ntBASIC15.5■□□□□ 0.07
RETP07949 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RETP07949 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RETP07949 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RETP07949 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RETP07949 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RETP07949 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.5■□□□□ 0.07
RETP07949 AC006058.4-201ENST00000624016 1670 ntBASIC15.5■□□□□ 0.07
RETP07949 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RETP07949 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RETP07949 AC023824.1-201ENST00000562945 2975 ntBASIC15.5■□□□□ 0.07
RETP07949 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
RETP07949 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.5■□□□□ 0.07
RETP07949 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.5■□□□□ 0.07
RETP07949 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
RETP07949 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RETP07949 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RETP07949 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.49■□□□□ 0.07
RETP07949 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.49■□□□□ 0.07
RETP07949 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.49■□□□□ 0.07
RETP07949 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.49■□□□□ 0.07
RETP07949 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RETP07949 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RETP07949 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RETP07949 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
RETP07949 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RETP07949 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RETP07949 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RETP07949 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RETP07949 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RETP07949 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RETP07949 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RETP07949 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
RETP07949 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RETP07949 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RETP07949 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RETP07949 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RETP07949 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.49■□□□□ 0.07
RETP07949 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RETP07949 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.49■□□□□ 0.07
RETP07949 FTLP1-201ENST00000449155 526 ntBASIC15.49■□□□□ 0.07
RETP07949 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.49■□□□□ 0.07
RETP07949 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RETP07949 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.49■□□□□ 0.07
RETP07949 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.49■□□□□ 0.07
RETP07949 AC015910.1-201ENST00000579400 975 ntBASIC15.49■□□□□ 0.07
RETP07949 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.49■□□□□ 0.07
RETP07949 AL451050.2-201ENST00000606967 682 ntBASIC15.49■□□□□ 0.07
RETP07949 AC097724.1-201ENST00000609581 426 ntBASIC15.49■□□□□ 0.07
RETP07949 AL353726.2-201ENST00000623259 884 ntBASIC15.49■□□□□ 0.07
RETP07949 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.49■□□□□ 0.07
RETP07949 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC15.49■□□□□ 0.07
RETP07949 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.49■□□□□ 0.07
RETP07949 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RETP07949 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.49■□□□□ 0.07
RETP07949 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RETP07949 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
RETP07949 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.49■□□□□ 0.07
RETP07949 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RETP07949 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RETP07949 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.49■□□□□ 0.07
RETP07949 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
RETP07949 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
RETP07949 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.49■□□□□ 0.07
RETP07949 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RETP07949 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RETP07949 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RETP07949 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.49■□□□□ 0.07
RETP07949 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RETP07949 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RETP07949 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RETP07949 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RETP07949 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.48■□□□□ 0.07
RETP07949 AC013268.4-201ENST00000637413 2228 ntBASIC15.48■□□□□ 0.07
RETP07949 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RETP07949 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RETP07949 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.48■□□□□ 0.07
RETP07949 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
RETP07949 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RETP07949 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RETP07949 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RETP07949 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RETP07949 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.48■□□□□ 0.07
RETP07949 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.48■□□□□ 0.07
RETP07949 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.48■□□□□ 0.07
RETP07949 KRT18P43-201ENST00000469825 1281 ntBASIC15.48■□□□□ 0.07
RETP07949 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.48■□□□□ 0.07
RETP07949 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.48■□□□□ 0.07
RETP07949 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
RETP07949 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
RETP07949 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RETP07949 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.48■□□□□ 0.07
RETP07949 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RETP07949 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.48■□□□□ 0.07
RETP07949 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RETP07949 DRD5P1-201ENST00000456605 1438 ntBASIC15.48■□□□□ 0.07
RETP07949 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.48■□□□□ 0.07
RETP07949 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.48■□□□□ 0.07
RETP07949 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RETP07949 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms