Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.2■□□□□ 0.02
CAPN1P07384 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.2■□□□□ 0.02
CAPN1P07384 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN1P07384 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
CAPN1P07384 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.2■□□□□ 0.02
CAPN1P07384 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CAPN1P07384 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.2■□□□□ 0.02
CAPN1P07384 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CAPN1P07384 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN1P07384 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN1P07384 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.2■□□□□ 0.02
CAPN1P07384 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN1P07384 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN1P07384 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.2■□□□□ 0.02
CAPN1P07384 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN1P07384 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN1P07384 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CAPN1P07384 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CAPN1P07384 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.19■□□□□ 0.02
CAPN1P07384 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CAPN1P07384 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CAPN1P07384 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CAPN1P07384 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
CAPN1P07384 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CAPN1P07384 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.19■□□□□ 0.02
CAPN1P07384 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.19■□□□□ 0.02
CAPN1P07384 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CAPN1P07384 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.19■□□□□ 0.02
CAPN1P07384 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CAPN1P07384 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CAPN1P07384 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CAPN1P07384 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CAPN1P07384 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CAPN1P07384 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CAPN1P07384 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.19■□□□□ 0.02
CAPN1P07384 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CAPN1P07384 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.19■□□□□ 0.02
CAPN1P07384 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.19■□□□□ 0.02
CAPN1P07384 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.19■□□□□ 0.02
CAPN1P07384 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CAPN1P07384 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CAPN1P07384 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
CAPN1P07384 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CAPN1P07384 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CAPN1P07384 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CAPN1P07384 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CAPN1P07384 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
CAPN1P07384 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CAPN1P07384 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CAPN1P07384 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CAPN1P07384 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CAPN1P07384 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CAPN1P07384 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CAPN1P07384 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.19■□□□□ 0.02
CAPN1P07384 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CAPN1P07384 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CAPN1P07384 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
CAPN1P07384 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CAPN1P07384 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CAPN1P07384 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CAPN1P07384 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CAPN1P07384 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CAPN1P07384 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CAPN1P07384 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CAPN1P07384 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CAPN1P07384 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CAPN1P07384 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.18■□□□□ 0.02
CAPN1P07384 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CAPN1P07384 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.18■□□□□ 0.02
CAPN1P07384 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.18■□□□□ 0.02
CAPN1P07384 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CAPN1P07384 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CAPN1P07384 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.18■□□□□ 0.02
CAPN1P07384 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.18■□□□□ 0.02
CAPN1P07384 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CAPN1P07384 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CAPN1P07384 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CAPN1P07384 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CAPN1P07384 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.18■□□□□ 0.02
CAPN1P07384 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.18■□□□□ 0.02
CAPN1P07384 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.18■□□□□ 0.02
CAPN1P07384 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.18■□□□□ 0.02
CAPN1P07384 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CAPN1P07384 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.18■□□□□ 0.02
CAPN1P07384 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CAPN1P07384 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CAPN1P07384 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CAPN1P07384 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CAPN1P07384 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CAPN1P07384 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CAPN1P07384 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.18■□□□□ 0.02
CAPN1P07384 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CAPN1P07384 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CAPN1P07384 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CAPN1P07384 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CAPN1P07384 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CAPN1P07384 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.18■□□□□ 0.02
CAPN1P07384 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.18■□□□□ 0.02
CAPN1P07384 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.18■□□□□ 0.02
CAPN1P07384 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms